Study of Bacterial Diversity of Mangroves Rhizosphere

Abstract

Microbial diversity has been an important facet of scientific research, since microbes promise a plethora of biomolecules which are otherwise not found in nature. Microbes are subjected to high level of competition for survival in the environment, and hence develop mechanisms of defense. The biomolecules produced by these microbes as part of their defense or survival mechanism, are of importance for human and animal drugs and many other industrial and environmental applications. The marine counterparts of these terrestrial microbes have yet higher potential, since the marine environment has higher biotic and abiotic stresses, leading to new molecule discovery. In the current study, a bacterial diversity study of the culturable bacteria of the mangrove rhizosphere of Avicennia marina has been undertaken, to understand the flora diversity. Mangroves are unique ecosystems which are under a combination of marine and terrestrial influence. Mangroves are seaward, inland and also found in creek areas. This diversity in their habitat, leads them to produce variable root exudates, which support the growth of different types of organisms. This study has revealed that certain species are dominant in these ecosystems irrespective of the biotic and abiotic stresses, whereas certain species appear only at neutral pH. The study will help select organisms for further biomolecule discovery programs, based on their environment of isolation and other growth parameters.

Share and Cite:

Sakhia, N. , Prajapati, S. , Shetty, V. , Bhatt, S. and Bhadalkar, A. (2016) Study of Bacterial Diversity of Mangroves Rhizosphere. Open Journal of Marine Science, 6, 23-31. doi: 10.4236/ojms.2016.61003.

Conflicts of Interest

The authors declare no conflicts of interest.

References

[1] Bhatt, S., Shah, D.G. and Desai, N. (2009) The Mangrove Diversity of Purna Estuary, South Gujarat, India. Tropical Ecology, 50, 287-293.
[2] Kathiresan, K. (2003a) How Do Mangrove Forests Induce Sedimentation? Revista de Biologia Tropical, 51, 355-360.
[3] Tomlinson, P.B. (1986) The Botany of Mangroves. Cambridge Tropical Biology Series. Cambridge University Press, Cambridge.
[4] Saenger, P. (2002) Mangrove Ecology, Silviculture and Conservation. Kluwer Academic Publishers, Dordrecht, 11-18. http://dx.doi.org/10.1007/978-94-015-9962-7
[5] Kathiresan, K. (2003) Global Policies and Institution. Biodiversity in Mangrove Ecosystems. In: Kathiresan, K. and Subramanian, A.N., Eds., UNU-UNESCO International Training Course on Biodiversity in Mangrove Ecosystems, Course Manual, Annamalai University, India, 317-332.
[6] Anonymous (2005) State of Forest Report 2003. Forest Survey of India, Ministry of Environment and Forests, Dehradun.
[7] Brinda, V. and Mathew, A. (2012) Molecular Characterization and Identification of Unknown Bacteria from Waste Water. Indian Journal of Innovations and Developments, 1, 87-91.
[8] Pace, N.R. (1997) A Molecular View of Microbial Diversity and the Biosphere. Science, 272, 734-740. http://dx.doi.org/10.1126/science.276.5313.734
[9] Malik, S., Beer, M., Megharaj, M. and Naidu, R. (2008) The Use of Molecular Techniques to Characterize the Microbial Communities in Contaminated Soil and Water. Environment International, 34, 265-276. http://dx.doi.org/10.1016/j.envint.2007.09.001
[10] Schut, F., De-Vries, E.J., Gotitschal, J.C., Robertson, B.R., Harder, W., Prins, R.A. and Button, D.K. (1993) Isolation of Typical Marine Bacteria by Dilution Culture: Growth, Maintenance, and Characteristics of Isolates under Laboratory Conditions. Applied and Environmental Microbiology, 59, 2150-2160.
[11] Beisher, L. (1991) Microbiology in Practice, a Self Instructional Laboratory Course. Harper Collins Publishers, Inc., New York, 53-131.
[12] Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: Improving the Sensitivity of Progressive Multiple Sequence Alignment through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice. Nucleic Acids Research, 22, 4673-4680.
http://dx.doi.org/10.1093/nar/22.22.4673
[13] Nair, A.V., Vijayan, K.K. and Chakraborty, K. (2012) Diversity and Characterization of Antagonistic Bacteria from Tropical Estuarine Habitats of Cochin, India for Fish Health Management. World Journal for Microbiology and Biotechnology, 28, 2581-2592. http://dx.doi.org/10.1007/s11274-012-1067-5
[14] Shafipour, M., Ghane, M., Rahimi, A.S., Livani, S. and Ghaemi, E. (2014) The Comparison of Biochemical and Sequencing 16SrDNA Gene Methods to Identify Nontuberculous Mycobacteria. Archives of Razi Institute, 69, 137-142.
[15] Therese, K., Bartell, J., Deepa, P., Mangaiyarkarasi, S., Ward, D. and Dajcs, J. (2009) DNA Sequencing by Microseq Kit Targeting 16SrRNA Gene for Species Level Identification of Mycobacteria. Indian Journal of Medical Research, 129, 176-181.

Copyright © 2023 by authors and Scientific Research Publishing Inc.

Creative Commons License

This work and the related PDF file are licensed under a Creative Commons Attribution 4.0 International License.