Article citationsMore>>
Punta, M., Coggill, P.C., Eberhardt, R.Y., Mistry, J., Tate, J., Boursnell, C., Pang, N., Forslund, K., Ceric, G., Clements, J, Heger, A., Holm, L., Sonnhammer, E.L.L., Eddy, S.R., Bateman, A. and Finn, R.D. (2012) The Pfam protein families database. Nucleic Acids Research, 40, D290-D301. http://dx.doi.org/10.1093/nar/gkr1065
has been cited by the following article:
-
TITLE:
Predicting residue contacts for protein-protein interactions by integration of multiple information
AUTHORS:
Tu Kien T. Le, Osamu Hirose, Vu Anh Tran, Thammakorn Saethang, Lan Anh T. Nguyen, Xuan Tho Dang, Duc Luu Ngo, Mamoru Kubo, Yoichi Yamada, Kenji Satou
KEYWORDS:
Residue-Residue Contacts;Domain-Domain Interactions; Protein-Protein Interactions; Domain Interfaces; Residue Co-Evolution; Contact Potentials
JOURNAL NAME:
Journal of Biomedical Science and Engineering,
Vol.7 No.1,
January
24,
2014
ABSTRACT: Detailed
knowledge of interfacial region between interacting proteins is not only
helpful in annotating function for proteins, but also very important for
structure-based drug design and disease treatment. However, this is one of the
most difficult tasks and current methods are constrained by some factors. In
this study, we developed a new method to predict residue-residue contacts of
two interacting protein domains by integrating information about evolutionary
couplings andamino acid pairwise contact potentials, as well as domain-domain
interaction interfaces. The experimental results showed that our proposed
method outperformed the previous method with the same datasets. Moreover, the
method promises an improvement in the source of template-based protein docking.
Related Articles:
-
Casimir Komenan
-
Ngozi Grace Emordi, Iweriolor Sunday, Onyekpe Basil Obimma
-
Mudassar Iqbal, Anima Langer, Afroz Alam
-
Zheng Yuan
-
Igor N. Kosenko, Olga S. Urman, Egor K. Metelkin, Boris N. Shurygin, Alexander E. Igolnikov