<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">MSCE</journal-id><journal-title-group><journal-title>Journal of Materials Science and Chemical Engineering</journal-title></journal-title-group><issn pub-type="epub">2327-6045</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/msce.2015.38001</article-id><article-id pub-id-type="publisher-id">MSCE-58020</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Chemistry&amp;Materials Science</subject></subj-group></article-categories><title-group><article-title>
 
 
  Electronic and Optical Properties of Nanostructures and Its Relationship with Harari Index
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>li</surname><given-names>Asghar Khakpoor</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Bahare</surname><given-names>Agahi Keshe</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>Department of Physics, Islamic Azad University-Central Tehran Branch (IAUCTB), Tehran, Iran</addr-line></aff><pub-date pub-type="epub"><day>16</day><month>07</month><year>2015</year></pub-date><volume>03</volume><issue>08</issue><fpage>1</fpage><lpage>5</lpage><history><date date-type="received"><day>28</day>	<month>May</month>	<year>2015</year></date><date date-type="rev-recd"><day>accepted</day>	<month>12</month>	<year>July</year>	</date><date date-type="accepted"><day>16</day>	<month>July</month>	<year>2015</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  The topological index of molecular graph is a number that attributed to the molecular graph and is valid than graph isomorphism, this number can reflect the properties of the molecules. In this study, Harari index in family phenacenes was calculated with some electronic and optical properties desired for a number of elements of the family, a model for predicting the electronic and optical properties by Harari index was prepared. To offer this model using mathematical software, electronic and optical properties of phenacenes calculated and compared with the data sources.
 
</p></abstract><kwd-group><kwd>Nanostructures</kwd><kwd> Harari Index</kwd><kwd> Electronic and Optical Properties</kwd><kwd> Gap Energy</kwd><kwd> Phenacenes</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Around mid-century theoretical chemists and physicists noted that various features of molecular structure of organic matter can be established by examining the appropriate structure to obtain the molecular graph. These graph constants are appropriate for the purposes of the physical and chemical and called topological indices. Topological indices are real numbers in terms of graph parameters (such as the degree of vertices, distances, etc.) in the study on molecular graphs presented in chemistry and physical and chemical properties of molecules can describe [<xref ref-type="bibr" rid="scirp.58020-ref1">1</xref>] . One of these topological indices, Harari index was introduced in 1991 by Professor Harari [<xref ref-type="bibr" rid="scirp.58020-ref2">2</xref>] .</p><p>Today, scientists are trying to design and provide nanoscale electronic components. Manufacture nanoscale faced with limitations in many cases virtually impossible, therefore, due to small parts in recent years has led to the creation of nanostructures branch in electronics [<xref ref-type="bibr" rid="scirp.58020-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.58020-ref4">4</xref>] .</p><p>Molecular electronic also called moltronic is a branch of nano-electronics that study the use of small groups of molecules in nano dimensions. Phenacenes are organic molecules that are highly regarded in molecular electronics and nanoscale. Because of the important electronic properties of the family, many research and studies have been done on them [<xref ref-type="bibr" rid="scirp.58020-ref5">5</xref>] . But in the molecules that the number of rings is more than six rings, measuring the electronic and optical properties needed to spend a long time and high cost. In these circumstances, there is a model for predicting the electronic and optical properties will be particularly important [<xref ref-type="bibr" rid="scirp.58020-ref6">6</xref>] .</p>Definitions<p>Graph in mathematic is non-empty set of objects called vertices (V) are the vertices by lines called edges (E) connected and it show as G = G(V, E). A molecular graph is simple graph, which is mainly composed of atoms of one molecule and the bonds between the atoms, are graph edges. In chemical graphs hydrogen atoms have been removed and will be ignored and the degree of each vertex is maximum 4 and all bonds between atoms are considered single.</p><p>Topological indexes are defined on the basis of graph theory [<xref ref-type="bibr" rid="scirp.58020-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.58020-ref8">8</xref>] .</p><p>One of these topological indices, Harari index is defined by:</p><disp-formula id="scirp.58020-formula100"><label>(1)</label><graphic position="anchor" xlink:href="http://html.scirp.org/file/1-1740197x6.png"  xlink:type="simple"/></disp-formula><p>where d<sub>ij</sub> is elements of the distance matrix.</p></sec><sec id="s2"><title>2. Methodology</title><p>The purpose of this paper is to obtain a simple model based on graph theory to predict optical and electronic properties of phenacenes.</p><p>Chemical formula phenacenes family is C<sub>4n+2</sub>H<sub>2n+4</sub> with the n ≥ 2. For example, the Harari index for C<sub>10</sub>H<sub>8</sub> molecules is calculated. In <xref ref-type="fig" rid="fig1">Figure 1</xref>. The simple graph of the molecule is drawn.</p><p>According to <xref ref-type="fig" rid="fig1">Figure 1</xref>, the inverse matrix of C<sub>10</sub>H<sub>8</sub> calculated in <xref ref-type="table" rid="table1">Table 1</xref>. Is as follows:</p><p>Using the Equation (1) Harari index for molecules C<sub>10</sub>H<sub>8</sub> number 23.9 obtained (H = 23.9).</p><p>Harary index molecules C<sub>4n+2</sub>H<sub>2n+4</sub> to n = 7 as well as the calculated and results in <xref ref-type="table" rid="table2">Table 2</xref> shown.</p><fig id="fig1"  position="float"><label><xref ref-type="fig" rid="fig1">Figure 1</xref></label><caption><title> The simple graph of the molecule C<sub>10</sub>H<sub>8</sub></title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/1-1740197x7.png"/></fig><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> The inverse matrix of C<sub>10</sub>H<sub>8</sub></title></caption><table><tbody><thead><tr><th align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x8.png" xlink:type="simple"/></inline-formula></th></tr></thead></tbody></table></table-wrap><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Harary index molecules C<sub>4n+2</sub>H<sub>2n+4</sub> to n = 7</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Chemical Formula</th><th align="center" valign="middle" >Simple Graph</th><th align="center" valign="middle" >IUPAC Name</th><th align="center" valign="middle" >H</th></tr></thead><tr><td align="center" valign="middle" >C<sub>10</sub>H<sub>8 </sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x9.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >Naphthalene</td><td align="center" valign="middle" >23.9</td></tr><tr><td align="center" valign="middle" >C<sub>14</sub>H<sub>10 </sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x10.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >Phenanthrene</td><td align="center" valign="middle" >41.1</td></tr><tr><td align="center" valign="middle" >C<sub>18</sub>H<sub>12</sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x11.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >Chrysene</td><td align="center" valign="middle" >60.7</td></tr><tr><td align="center" valign="middle" >C<sub>22</sub>H<sub>14 </sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x12.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >Picene</td><td align="center" valign="middle" >82.1</td></tr><tr><td align="center" valign="middle" >C<sub>26</sub>H<sub>16 </sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x13.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >Fulminene</td><td align="center" valign="middle" >104.9</td></tr><tr><td align="center" valign="middle" >C<sub>30</sub>H<sub>18 </sub></td><td align="center" valign="middle" ><inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/1-1740197x14.png" xlink:type="simple"/></inline-formula></td><td align="center" valign="middle" >7-phenacene</td><td align="center" valign="middle" >129</td></tr></tbody></table></table-wrap></sec><sec id="s3"><title>3. Results</title><p>Some electronic and physical properties of phenacenes family (C<sub>4n+2</sub>H<sub>2n+4</sub>), the Ionization Energy, Bind Energy, Gap Energy and Electron Affinity Energy using software (Gaussian 09) was calculated and experimental data in the valid literature was compared. The results in <xref ref-type="table" rid="table3">Table 3</xref>. Had shown [<xref ref-type="bibr" rid="scirp.58020-ref6">6</xref>] [<xref ref-type="bibr" rid="scirp.58020-ref9">9</xref>] [<xref ref-type="bibr" rid="scirp.58020-ref10">10</xref>] .</p><p>Using <xref ref-type="table" rid="table2">Table 2</xref> and <xref ref-type="table" rid="table3">Table 3</xref> data changes plot E<sub>gap</sub> and E<sub>bind</sub> in Harari index (H) in the <xref ref-type="fig" rid="fig2">Figure 2</xref> and <xref ref-type="fig" rid="fig3">Figure 3</xref> is drawn:</p><p>As the <xref ref-type="fig" rid="fig2">Figure 2</xref> and <xref ref-type="fig" rid="fig3">Figure 3</xref> can be predicted E<sub>gap</sub> and E<sub>bind</sub> in phenacenes family by the Harari index is possible and this prediction is very accurate, so that E<sub>bind</sub> and E<sub>gap</sub> carefully before R<sup>2</sup> = 1 predicted.</p><p><xref ref-type="fig" rid="fig2">Figure 2</xref> and <xref ref-type="fig" rid="fig3">Figure 3</xref> can be expected to provide the following relationships:</p><disp-formula id="scirp.58020-formula101"><label>(2)</label><graphic position="anchor" xlink:href="http://html.scirp.org/file/1-1740197x15.png"  xlink:type="simple"/></disp-formula><disp-formula id="scirp.58020-formula102"><label>(3)</label><graphic position="anchor" xlink:href="http://html.scirp.org/file/1-1740197x16.png"  xlink:type="simple"/></disp-formula><p>Also in the Figures <xref ref-type="fig" rid="fig4">Figure 4</xref> and <xref ref-type="fig" rid="fig5">Figure 5</xref> changes diagram in both property Ionization Energy and Electron Affinity Energy of phenacenes family in term of Harari index (H) plotted.</p><p>Prediction of E<sub>Ionization</sub>, E<sub>Affinity</sub> by the Harari index Figures <xref ref-type="fig" rid="fig4">Figure 4</xref> and <xref ref-type="fig" rid="fig5">Figure 5</xref> is associated with very high accuracy, so that predicted E<sub>Ionization</sub> and E<sub>Affinity</sub> will carefully R<sup>2</sup> = 1 is possible in the family phenacenes. The Ionization Energy (E<sub>Ionization</sub>) and Electron Affinity Energy (E<sub>Affinity</sub>) C<sub>4n+2</sub>H<sub>2n+4</sub> molecules can be predicted by the following relationship:</p><disp-formula id="scirp.58020-formula103"><label>(4)</label><graphic position="anchor" xlink:href="http://html.scirp.org/file/1-1740197x17.png"  xlink:type="simple"/></disp-formula><disp-formula id="scirp.58020-formula104"><label>(5)</label><graphic position="anchor" xlink:href="http://html.scirp.org/file/1-1740197x18.png"  xlink:type="simple"/></disp-formula></sec><sec id="s4"><title>4. Conclusions</title><p>As Figures 2-5 shown using the Harari topological index, some electronic and optical properties of phenacenes family are given by C<sub>4n+2</sub>H<sub>2n+4</sub> predict with great accuracy.</p><p>The success of the predicted energy gap E<sub>gap</sub>, bind energy E<sub>bind</sub>, ionization energy E<sub>Ionization</sub> and affinity electron energy E<sub>Affinity</sub> with Relations (2)-(5) is possible.</p><fig id="fig2"  position="float"><label><xref ref-type="fig" rid="fig2">Figure 2</xref></label><caption><title> Changes plot E<sub>gap</sub> in Harari index (H) for phenacenes family</title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/1-1740197x19.png"/></fig><fig id="fig3"  position="float"><label><xref ref-type="fig" rid="fig3">Figure 3</xref></label><caption><title> Changes plot E<sub>bind</sub> in Harari index (H) for phenacenes family</title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/1-1740197x20.png"/></fig><fig id="fig4"  position="float"><label><xref ref-type="fig" rid="fig4">Figure 4</xref></label><caption><title> Changes plot E<sub>Affinity</sub> in Harari index (H) for C<sub>4n+2</sub>H<sub>2n+4</sub></title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/1-1740197x21.png"/></fig><fig id="fig5"  position="float"><label><xref ref-type="fig" rid="fig5">Figure 5</xref></label><caption><title> Changes plot E<sub>Ionization</sub> in Harari index (H) for C<sub>4n+2 </sub>H<sub>2n+4</sub></title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/1-1740197x22.png"/></fig><table-wrap id="table3" ><label><xref ref-type="table" rid="table3">Table 3</xref></label><caption><title> E<sub>Affinity</sub>, E<sub>Gap</sub>, E<sub>Ionization</sub> and E<sub>Bind</sub> of phenacenes family</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Chemical Formula</th><th align="center" valign="middle" >IUPAC Name</th><th align="center" valign="middle" >E<sub>Bind</sub> (ev)</th><th align="center" valign="middle" >E<sub>Ionization</sub> (ev)<sub> </sub></th><th align="center" valign="middle" >E<sub>Gap</sub> (ev)</th><th align="center" valign="middle" >E<sub>Affinity</sub> (ev)</th></tr></thead><tr><td align="center" valign="middle" >C<sub>10</sub>H<sub>8 </sub></td><td align="center" valign="middle" >Naphthalene</td><td align="center" valign="middle" >3.89</td><td align="center" valign="middle" >7.8</td><td align="center" valign="middle" >4.36</td><td align="center" valign="middle" >−0.26</td></tr><tr><td align="center" valign="middle" >C<sub>14</sub>H<sub>10 </sub></td><td align="center" valign="middle" >Phenanthrene</td><td align="center" valign="middle" >3.65</td><td align="center" valign="middle" >7.53</td><td align="center" valign="middle" >4.19</td><td align="center" valign="middle" >−0.05</td></tr><tr><td align="center" valign="middle" >C<sub>18</sub>H<sub>12</sub></td><td align="center" valign="middle" >Chrysene</td><td align="center" valign="middle" >3.31</td><td align="center" valign="middle" >7.17</td><td align="center" valign="middle" >3.73</td><td align="center" valign="middle" >0.29</td></tr><tr><td align="center" valign="middle" >C<sub>22</sub>H<sub>14 </sub></td><td align="center" valign="middle" >Picene</td><td align="center" valign="middle" >3.17</td><td align="center" valign="middle" >7.04</td><td align="center" valign="middle" >3.70</td><td align="center" valign="middle" >0.40</td></tr><tr><td align="center" valign="middle" >C<sub>26</sub>H<sub>16 </sub></td><td align="center" valign="middle" >Fulminene</td><td align="center" valign="middle" >3</td><td align="center" valign="middle" >6.88</td><td align="center" valign="middle" >3.47</td><td align="center" valign="middle" >0.57</td></tr><tr><td align="center" valign="middle" >C<sub>30</sub>H<sub>18 </sub></td><td align="center" valign="middle" >7-phenacene</td><td align="center" valign="middle" >2.83</td><td align="center" valign="middle" >6.80</td><td align="center" valign="middle" >3.50</td><td align="center" valign="middle" >0.64</td></tr></tbody></table></table-wrap></sec><sec id="s5"><title>Acknowledgements</title><p>We would like to thank Islamic Azad University Central Tehran Branch (IAUCTB) for helpful protections. Also we acknowledge all those who have helped us with their support and cooperation in conducting this study.</p></sec><sec id="s6"><title>Cite this paper</title><p>Ali AsgharKhakpoor,Bahare AgahiKeshe, (2015) Electronic and Optical Properties of Nanostructures and Its Relationship with Harari Index. Journal of Materials Science and Chemical Engineering,03,1-5. doi: 10.4236/msce.2015.38001</p></sec><sec id="s7"><title>NOTES</title></sec></body><back><ref-list><title>References</title><ref id="scirp.58020-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Bonchev, D. (1983) Information Theoric for Characterization of Chemical Structures. Reserch Studies Press, Latchworth.</mixed-citation></ref><ref id="scirp.58020-ref2"><label>2</label><mixed-citation publication-type="other" xlink:type="simple">Plavsic, D., Nikolic, S., Trinajstic, N. and Mihalic, Z. (1993) On the Harary Index for the Characterization of Chemical Graphs. Journal of Mathematical Chemistry, 12, 235-250. http://dx.doi.org/10.1007/BF01164638</mixed-citation></ref><ref id="scirp.58020-ref3"><label>3</label><mixed-citation publication-type="other" xlink:type="simple">Pérez-Jiménez, A.J. and Sancho-Garca, J.C. (2009) Conductance Enhancement in Nanographene-Gold Junctions by Molecular π-Stacking. Journal of the American Chemical Society, 131, 14857-14867. http://dx.doi.org/10.1021/ja904372d</mixed-citation></ref><ref id="scirp.58020-ref4"><label>4</label><mixed-citation publication-type="other" xlink:type="simple">Sancho-García, J.C. and Pérez-Jiménez, A.J. (2009) Charge-Transport Properties of Prototype Molecular Materials for Organic Electronics Based on Graphene Nanoribbons. Physical Chemistry Chemical Physics, 11, 2741-2746. http://dx.doi.org/10.1039/b821748c</mixed-citation></ref><ref id="scirp.58020-ref5"><label>5</label><mixed-citation publication-type="other" xlink:type="simple">Jiang, D. and Dai, S. (2008) Circumacenes versus Periacenes: HOMO-LUMO Gap and Transition from Nonmagnetic to Magnetic Ground State with Size. Chemical Physics Letters, 466, 72-75. http://dx.doi.org/10.1016/j.cplett.2008.10.022</mixed-citation></ref><ref id="scirp.58020-ref6"><label>6</label><mixed-citation publication-type="book" xlink:type="simple">Lias, S. (2005) Ionization Energy Evaluation. In: Linstrom, P.J. and Mallard, W.G., Eds., NIST Chemistry WebBook, NIST Standard Reference Database Number 69, National Institute of Standards and Technology, Gaithersburg. http://webbook.nist.gov</mixed-citation></ref><ref id="scirp.58020-ref7"><label>7</label><mixed-citation publication-type="other" xlink:type="simple">Trinajstic, N. (1992) Chemical Graph Theory. 2nd Edition, CRC Press, Boca Raton.</mixed-citation></ref><ref id="scirp.58020-ref8"><label>8</label><mixed-citation publication-type="other" xlink:type="simple">Ezra, G.S. (1982) Lecture Notes in Chemistry. Springer, Germany.</mixed-citation></ref><ref id="scirp.58020-ref9"><label>9</label><mixed-citation publication-type="other" xlink:type="simple">Kadantsev, E.S., Stott, M.J. and Rubio, A. (2006) Electronic Structure and Excitations in Oligoacenes from ab Initio Calculations. The Journal of Chemical Physics, 124, 134901. http://dx.doi.org/10.1063/1.2186999</mixed-citation></ref><ref id="scirp.58020-ref10"><label>10</label><mixed-citation publication-type="other" xlink:type="simple">Malloci, G., Mulas, G., Cappellini, G. and Joblin, C. (2007) Time-Dependent Density Functional Study of the Electronic Spectra of Oligoacenes in the Charge States -1, 0, +1, and +2. Chemical Physics, 340, 43-58. http://dx.doi.org/10.1016/j.chemphys.2007.07.046</mixed-citation></ref></ref-list></back></article>