<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">AMPC</journal-id><journal-title-group><journal-title>Advances in Materials Physics and Chemistry</journal-title></journal-title-group><issn pub-type="epub">2162-531X</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ampc.2020.106010</article-id><article-id pub-id-type="publisher-id">AMPC-101256</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Chemistry&amp;Materials Science</subject><subject> Physics&amp;Mathematics</subject></subj-group></article-categories><title-group><article-title>
 
 
  Structure, Plastic Deformation of Polyethylene: A Molecular Dynamics Method
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Dung</surname><given-names>Nguyen Trong</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Tuan</surname><given-names>Tran Quoc</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Hue</surname><given-names>Dang Thi Minh</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Cuong</surname><given-names>Nguyen Chinh</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Van</surname><given-names>Duong Quoc</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>Faculty of Physics, Hanoi National University of Education, Ha Noi, Vietnam</addr-line></aff><aff id="aff3"><addr-line>Faculty of Electrical and Electronics Engineering, Thuyloi University, Ha Noi, Vietnam</addr-line></aff><aff id="aff2"><addr-line>Faculty of Basic Science, University of Transport Technology, Ha Noi, Vietnam</addr-line></aff><pub-date pub-type="epub"><day>30</day><month>06</month><year>2020</year></pub-date><volume>10</volume><issue>06</issue><fpage>125</fpage><lpage>150</lpage><history><date date-type="received"><day>19,</day>	<month>April</month>	<year>2020</year></date><date date-type="rev-recd"><day>27,</day>	<month>June</month>	<year>2020</year>	</date><date date-type="accepted"><day>30,</day>	<month>June</month>	<year>2020</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  This paper studies the influence factors of atoms number (N) at temperature (T) and after annealing time (t) on the structure shape and the plastic deformation of Polyethylene C
  <sub style="white-space:normal;">2</sub>
  H
  <sub style="white-space:normal;">4</sub>
   (PE) by the Molecular Dynamics (MD) method with Dreading pair interaction, cyclic boundary conditions and plastic deformation of Polyethylene (PE) be done by stretching method according to the z-axis. The results of structure, plastic deformation of PE are analyzed through size (l), the total energy of the system (E
  <sub style="white-space:normal;">tot</sub>
  ), shape and associated energy (E
  <sub style="white-space:normal;">bond</sub>
  ), angular binding energy (E
  <sub style="white-space:normal;">angle</sub>
  ), energy E
  <sub style="white-space:normal;">dihedral</sub>
  , interactive energy Vander Walls (E
  <sub style="white-space:normal;">non-bonding</sub>
  ). When increasing N, t leads to the number of structural units of Face-Centred Cubic (FCC), Body-Centered Cubic (BCC) and Hexagonal Close-Packed (HCP) increasing, but Amorphous (Amor) decreases while the angle between the atoms is a constant corresponding to 109.5&amp;#176;
  . Besides, the length of the link (r) increases from r = 1.529 &amp;#197;
   to r = 1.558 &amp;#197;
   while the plastic deformation energy of PE gets an enormous change and the bonding angle at 109.27&amp;#176;
  . The length of the link r = 1.529 &amp;#197;
   and the size (l) of the PE material increase from l = 3.73 nm to l = 6.63 nm while the total energy of system (E
  <sub style="white-space:normal;">total</sub>
  ) decreases from E
  <sub style="white-space:normal;">total</sub>
   = &amp;#8722;1586 eV to E
  <sub style="white-space:normal;">total</sub>
   = &amp;#8722;7891 eV with the transition temperature is T = 103 K. Increasing the number of atoms leads to increasing the length of the link. The total energy E
  <sub style="white-space:normal;">total </sub>
  of the system decreases, but the number of structural units in FCC, HCP, BCC and Amor increase, which leads to the length of the link increases, the E
  <sub style="white-space:normal;">total</sub>
   decreases, and there is a change in the plastic deformation characteristics of PE. In contrast, increasing T leads to the plastic deformation increases, and PE moves from the amorphous state to the liquid state. The obtained results are very significant for future experimental research.
 
</p></abstract><kwd-group><kwd>Molecular Dynamics</kwd><kwd> Atoms Number</kwd><kwd> Annealing Time</kwd><kwd> Polyethylene</kwd><kwd> Plastic Deformation</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Polyethylene C<sub>2</sub>H<sub>4</sub> (PE) is a flexible plastic existing in an amorphous state and widely used in consumer products. In particular, PE plays an important role in material science, which is considered as a bright candidate for new industrial materials. When PE is combined with wood, it creates an environmentally Wood Plastic Composite material (WPC) [<xref ref-type="bibr" rid="scirp.101256-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref2">2</xref>] such as reducing energy consumption in production, lightweight, and sound insulation [<xref ref-type="bibr" rid="scirp.101256-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref4">4</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref5">5</xref>]; reducing pollution and greenhouse effect; enhancing biodegradability [<xref ref-type="bibr" rid="scirp.101256-ref6">6</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref8">8</xref>]. Also, WPC is widely used in industries such as automotive, construction, et al. [<xref ref-type="bibr" rid="scirp.101256-ref6">6</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref9">9</xref>]. The flexible plastic resins are made of Polyethylene (PE) [<xref ref-type="bibr" rid="scirp.101256-ref8">8</xref>], Polypropylen [<xref ref-type="bibr" rid="scirp.101256-ref10">10</xref>], Polyvinyl Clorua (PVC) [<xref ref-type="bibr" rid="scirp.101256-ref11">11</xref>] and polystyrene (PS) [<xref ref-type="bibr" rid="scirp.101256-ref12">12</xref>]. The Wood components include wood pulp, cotton, wheat straw, bagasse, and rice husk [<xref ref-type="bibr" rid="scirp.101256-ref13">13</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref15">15</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref16">16</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref17">17</xref>]. PE plastic is used in practice including both High-Density Polyethylene (HDPE) and low-density WPC [<xref ref-type="bibr" rid="scirp.101256-ref18">18</xref>]. PE, as a binder and wood pulp as an additive; HDPE includes material hydrophilic wood pulp and PE hydrophobic wood pulp [<xref ref-type="bibr" rid="scirp.101256-ref19">19</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref20">20</xref>]. Therefore, PE is considered as an important additive component in industrial applications. PE is divided into many types, mainly based on density, monomer, flexibility [<xref ref-type="bibr" rid="scirp.101256-ref21">21</xref>], and copolymer [<xref ref-type="bibr" rid="scirp.101256-ref22">22</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref23">23</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref24">24</xref>]. In particular, with Low-Density Polyethylene (LDPE) which is the most commonly used and commercially produced at high pressure (P), P = 2400 Bar, temperature (T) from T = 363 K to T = 383 K [<xref ref-type="bibr" rid="scirp.101256-ref25">25</xref>].</p><p>To study this material, it is good to use the experimental, theoretical, and simulation methods. As for the experimental method, using pressing methods and multi-layer extrusion method with low cost has high durability, ductility [<xref ref-type="bibr" rid="scirp.101256-ref26">26</xref>] and increasing stress [<xref ref-type="bibr" rid="scirp.101256-ref27">27</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref28">28</xref>] as Jatin et al. [<xref ref-type="bibr" rid="scirp.101256-ref29">29</xref>], Kurz et al. [<xref ref-type="bibr" rid="scirp.101256-ref30">30</xref>], Pouriayevali et al. [<xref ref-type="bibr" rid="scirp.101256-ref31">31</xref>] for that plastic deformation of PE is an isotropic function with pressure putting on (the deformation (ε) in the experiment which is always less than ε &lt; 0.12); Epee et al. [<xref ref-type="bibr" rid="scirp.101256-ref32">32</xref>] suggested that the deformation of the polymer with ε &lt; 800 s<sup>−1</sup>; Argon et al. [<xref ref-type="bibr" rid="scirp.101256-ref33">33</xref>] suggested that plastic deformation is due to the twisted bonding pairs along the polymer chain; Roberson suggested that the shear stress is caused by changing angles and movements of molecules [<xref ref-type="bibr" rid="scirp.101256-ref2">2</xref>]; Eyring et al. [<xref ref-type="bibr" rid="scirp.101256-ref1">1</xref>] suggested that the plastic deformation is caused by the shear stress, structural changing, and binding energy [<xref ref-type="bibr" rid="scirp.101256-ref34">34</xref>] - [<xref ref-type="bibr" rid="scirp.101256-ref40">40</xref>]. With the simulation method, Deng et al. [<xref ref-type="bibr" rid="scirp.101256-ref41">41</xref>] suggested that plastic deformation is caused by the local structure. Besides, Maeda, Takeuchi [<xref ref-type="bibr" rid="scirp.101256-ref42">42</xref>], Srolovitz et al. [<xref ref-type="bibr" rid="scirp.101256-ref43">43</xref>] successfully used the molecular statistical method (MS) to study the deformation of three-dimensional metal glasses; Theodorou and Suter [<xref ref-type="bibr" rid="scirp.101256-ref44">44</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref45">45</xref>] successfully simulated the material in the glass polymer material and studied the deformation. After that, MS. Mott et al. [<xref ref-type="bibr" rid="scirp.101256-ref46">46</xref>], Hutnick et al. [<xref ref-type="bibr" rid="scirp.101256-ref47">47</xref>] used this method to study the plastic deformation of Polypropylene and Polycarbonate. While Mott et al. suggested that the plastic deformation is the result of changing the displacement in atoms or molecular branches, Hutnick et al. suggested that the movement of atoms does not depend on chemical reactions. Similarly, Brown, Clarke [<xref ref-type="bibr" rid="scirp.101256-ref48">48</xref>], Mckechnie, and Clarke [<xref ref-type="bibr" rid="scirp.101256-ref49">49</xref>] successfully investigated the effect of temperature on the bond in glass polyethylene and mechanics of materials. It is said that increasing the plastic deformation and the length of the initial link is necessary. Although there have been many studies on the plastic deformation of PE in the static state or the dynamic state [<xref ref-type="bibr" rid="scirp.101256-ref48">48</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref50">50</xref>] - [<xref ref-type="bibr" rid="scirp.101256-ref57">57</xref>] such as Baltsas et al. [<xref ref-type="bibr" rid="scirp.101256-ref58">58</xref>], Haefele et al. [<xref ref-type="bibr" rid="scirp.101256-ref59">59</xref>], using simulation method with Low-Density Polyethylene (LDPE) at high pressure; Asteasuain et al. [<xref ref-type="bibr" rid="scirp.101256-ref60">60</xref>] use Graphical Optimization Tool (gOPT) of general PROcess Modelling System (gPROMS) simulator program to optimize LDPE; Bezzo et al. [<xref ref-type="bibr" rid="scirp.101256-ref61">61</xref>] successfully used Fluent, gPROMS for liquids by calculating molecular dynamics. Recently, Clarke [<xref ref-type="bibr" rid="scirp.101256-ref48">48</xref>] has successfully performed uniaxial deformation of amorphous Polymers with different deformation levels at low temperatures, which is obtained in qualitative form. Capaldi et al. [<xref ref-type="bibr" rid="scirp.101256-ref42">42</xref>] suggested that the compressive deformation of Polymer is the same as the change of angle, the angle shift along the chain; Li et al. [<xref ref-type="bibr" rid="scirp.101256-ref62">62</xref>] successfully performed Single-axis plastic deformation of Polyethylene (PE) amorphous by Monte Carlo method (MC) with FCC structure and bonding length (r), r = 1.53 &#197;. The result shows that there is a dependence on temperature (T), and the heating rate and Uniaxial Tension of the material [<xref ref-type="bibr" rid="scirp.101256-ref63">63</xref>]; Ospina et al. [<xref ref-type="bibr" rid="scirp.101256-ref64">64</xref>] using the MC simulation result of the initial plastic deformation stage of polyethylene gives the consistent result with the experimental result, and it does not reduce the plastic deformation [<xref ref-type="bibr" rid="scirp.101256-ref63">63</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref64">64</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref65">65</xref>]; factors that alter the structure of PE [<xref ref-type="bibr" rid="scirp.101256-ref66">66</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref67">67</xref>] as concentrations of impurities playing an important role in compounds [<xref ref-type="bibr" rid="scirp.101256-ref67">67</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref68">68</xref>].</p><p>The result shows that the phase transition of Polyethylene depends on the temperature [<xref ref-type="bibr" rid="scirp.101256-ref69">69</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref70">70</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref71">71</xref>] as the liquefaction process which is just below the room temperature T = 300 K, limited by the movement of atoms at transition layer between the crystal area and the amorphous region. This shift occurs very weakly in HDPE with temperature from T = 123 K to T = 173 K and it is linked with the movement of CH<sub>2</sub> groups attached to C<sub>2</sub>H<sub>4</sub> [<xref ref-type="bibr" rid="scirp.101256-ref72">72</xref>], the change in the molecular shape of the polymer depends on the relationship between temperature and pressure [<xref ref-type="bibr" rid="scirp.101256-ref73">73</xref>]; the phase transition depends on the heating rate, the total energy of the system during the deformation process [<xref ref-type="bibr" rid="scirp.101256-ref74">74</xref>]. The results show that the glass transition temperature (T<sub>g</sub>) depends on the movement of atoms with valuable in approx from T<sub>g</sub> = 133 K to T<sub>m</sub> = 408 K [<xref ref-type="bibr" rid="scirp.101256-ref75">75</xref>], and this is performed on experimental measurements [<xref ref-type="bibr" rid="scirp.101256-ref76">76</xref>].</p><p>Besides, many authors have successfully studied the plastic deformation of PE by the z-axis stretching method. The results show the influence of the chain length, the number of chains, the strain rate, and the temperature. This depends on the stress-strain [<xref ref-type="bibr" rid="scirp.101256-ref77">77</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref78">78</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref79">79</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref80">80</xref>] which is ended at the source of plastic deformation. Polyethylene is a problem that has not been explained in detail [<xref ref-type="bibr" rid="scirp.101256-ref81">81</xref>]. To solve the problem, we focus on studying the effect of atomic number, temperature, annealing time on the structure, and the plastic deformation of PE.</p></sec><sec id="s2"><title>2. Method of Calculation</title><p>Initially, randomly sow atomic number (N), N = 2000 atoms, 4000 atoms, 6000 atoms, 8000 atoms, 10,000 atoms Polyethylene (C<sub>2</sub>H<sub>4</sub> or PE) into the cube by the Molecular Dynamics (MD) method [<xref ref-type="bibr" rid="scirp.101256-ref42">42</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref44">44</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref82">82</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref83">83</xref>] Dreading pair interaction (1), cyclic boundary conditions [<xref ref-type="bibr" rid="scirp.101256-ref42">42</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref84">84</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref85">85</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref86">86</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref87">87</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref88">88</xref>] through the total energy of the system (E<sub>tot</sub>): E<sub>tot</sub> = E<sub>bond</sub> + E<sub>angle</sub> + E<sub>dihedral</sub> + E<sub>non</sub><sub>-bonding</sub> (1).</p><p>In it:</p><p>E bond ( r ) = 1 2 K b ( r − r 0 ) 2 , E dihedral ( φ ) = ∑ i = 0 3 C i ( cosφ ) i , E angle ( θ ) = 1 2 K θ ( θ − θ 0 ) 2 , E non-bonding ( r ) = 4ε [ ( σ r ) 12 − ( σ r ) 6 ] ,   r ≤ r c (1)</p><p>With: E<sub>bond</sub> is the bond energy, E<sub>angle</sub> is the bond angle energy, the E<sub>dihedral</sub> is dihedral energy, E<sub>non</sub><sub>-bonding</sub> is van der Waals energy in the Lennard-Jones interaction, E<sub>tot</sub> is the total energy of the system, K<sub>b</sub> = 350 kcal/mol, K<sub>θ</sub> = 60 kcal/mol∙rad<sup>2</sup> is the stiffness coefficient, the bond angle coefficient, r<sub>0</sub> = 1.53 &#197; is the bond length, θ<sub>0</sub> = 1.911 rad (109.5˚) is the link angle, C<sub>0</sub> = 1.736, C<sub>1</sub> = −4.490, C<sub>2</sub> = 0.776, C<sub>3</sub> = 6.99 (kcal/mol) are the coefficients, σ = 4.01 &#197; is the energy at 0 eV, ε = 0.112 kcal/mol is the dielectric constant, r<sub>c</sub> = 10&#197; is the radius interrupt.</p><p>After obtaining, all PE samples for running 10<sup>6</sup> steps molecular dynamics (MD) simulation recovery statistics at temperature (T), T = 500 K; 10<sup>6</sup> steps NPT (atomic number, pressure, and constant temperature) MD simulation at T = 500 K. After obtaining PE samples at T = 500 K, the samples were lowered from T = 500 K to T = 100 K. Particularly with N = 10000 atoms at T = 500 K, the temperature is lowered to T = 120 K, 100 K, 80 K, 60 K, 40 K. When increasing t, from t = 0 ps to t = 50 ps, 100 ps, 150 ps, 200 ps at T = 100 K. The temperature was set intentionally, which is to study PE material in the crystalline state with temperature the below glass transition temperature (T<sub>g</sub>), T<sub>g</sub> = 250 K [<xref ref-type="bibr" rid="scirp.101256-ref89">89</xref>], size (l) of PE material lying in the range from l = 3.73 nm to l = 6.36 nm, the time for each simulation step is Δt = 0.1 fs. The program code used to run the PE sample that is the open-source program code LAMMPS [<xref ref-type="bibr" rid="scirp.101256-ref90">90</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref91">91</xref>] with the heating rate, which is obeyed following the Nos&#233;-Hoover rule [<xref ref-type="bibr" rid="scirp.101256-ref92">92</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref93">93</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref94">94</xref>], van der Waal link [<xref ref-type="bibr" rid="scirp.101256-ref95">95</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref96">96</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref97">97</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref98">98</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref99">99</xref>]. To study the plastic deformation of PE under the effect of the force in the direction of the z-axis with the constant heating rate at pressure (P), P = 0 GPa by defining quantities in the direction of the z-axis single tension from the NPT equations of the PE shift process [<xref ref-type="bibr" rid="scirp.101256-ref91">91</xref>]. The stress components are calculated from energy contributions related to the length of the link, bonding angle, bipolar angle, and non-bonding interaction, which are combined with the Common Neighbor Analysis (CNA) method [<xref ref-type="bibr" rid="scirp.101256-ref100">100</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref101">101</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref102">102</xref>] by Ovito software.</p></sec><sec id="s3"><title>3. Results and Discussion</title><sec id="s3_1"><title>3.1. Effect of Atomic Number</title><sec id="s3_1_1"><title>3.1.1. The Phase Transition of Polyethylene</title><p>The result of the phase transition Polyethylene C<sub>2</sub>H<sub>4</sub> (PE) is shown in <xref ref-type="fig" rid="fig1">Figure 1</xref>.</p><p>The results show that after running the Recovery Statistics (RS), RS = 10<sup>6</sup> steps of moving the Molecular Dynamics (MD) simulation at the temperature (T), T = 500 K, then the pressure of the system (P) decreases, with PE 2000 atoms lead to P decreases from P = 4464 Bar to P = −144 Bar. At a steady state, when N increasing from N = 2000 atoms to N = 10,000 atoms leads to P increases from P = −144 Bar to P = 292 Bar (<xref ref-type="fig" rid="fig1">Figure 1</xref>(a)). Similarly, with the process of running 10<sup>6</sup> steps NPT (with atoms number, pressures, and temperatures is constant) leads to P changes on the range from P = −558 Bar to P = 706 Bar, with PE 10,000 atoms the P has the smallest change (<xref ref-type="fig" rid="fig1">Figure 1</xref>(b)). The process of temperature reduction from T = 500 K to T = 100 K shows that the P of PE 10,000 atoms has not changed significantly (<xref ref-type="fig" rid="fig1">Figure 1</xref>(c)). The energy values of PE at T = 100 K has value corresponding change. The total energy pair (E<sub>pair</sub>) decreases from E<sub>pair</sub> = −3014 eV to E<sub>pair</sub> = −15,161 eV (<xref ref-type="fig" rid="fig1">Figure 1</xref>(d)), the total electron bond energy (E<sub>bond</sub>) increases from E<sub>bond</sub> = 199 eV to E<sub>bond</sub> = 994 eV (<xref ref-type="fig" rid="fig1">Figure 1</xref>(e)), the total angle bond energy (E<sub>angle</sub>) increases from E<sub>angle</sub> = 223eV to E<sub>angle</sub> = 1158 eV (<xref ref-type="fig" rid="fig1">Figure 1</xref>(f)), the total dihedral energy (E<sub>dihed</sub>) increases from E<sub>dihed</sub> = 719 eV to E<sub>dihed</sub> = 3544 eV (<xref ref-type="fig" rid="fig1">Figure 1</xref>(g)) and E<sub>tot</sub> decreases from E<sub>tot</sub> = −1873 eV to E<sub>tot</sub> = −9465 eV (<xref ref-type="fig" rid="fig1">Figure 1</xref>(h)). Basing on the given result, after 10<sup>6</sup> steps moving of recovering statistics, then PE reached equilibrium; 10<sup>6</sup> steps moving NPT at temperature (T), T = 500 K lead to PE existed in a liquid state. When the temperature decreases from T = 500 K to T = 100 K leading to PE changes from the liquid state to a new crystalline state, running stably 10<sup>6</sup> steps NPT at T = 100 K obtained PE in the new crystalline state corresponds to the shape of PE (<xref ref-type="fig" rid="fig1">Figure 1</xref>(i)). As a result, when increasing atoms number (N) leads to the size (l) increases, but E<sub>tot</sub> decreases.</p></sec><sec id="s3_1_2"><title>3.1.2. Plastic Deformation Process of Polyethylene</title><p>The results of the plastic deformation process of Polyethylene (PE) at temperature (T), T = 100 K are shown in <xref ref-type="fig" rid="fig2">Figure 2</xref>, <xref ref-type="table" rid="table1">Table 1</xref>.</p><p>The obtained result shows that after the process of the temperature reduction from T = 500 K down to T = 100 K with 10<sup>6</sup> step MD simulation, the</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> The process of transforming the number of structural units after the number of different MD shift steps</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Shift step number (step)</th><th align="center" valign="middle" >0</th><th align="center" valign="middle" >2 &#215; 10<sup>5 </sup></th><th align="center" valign="middle" >4 &#215; 10<sup>5</sup></th><th align="center" valign="middle" >6 &#215; 10<sup>5</sup></th><th align="center" valign="middle" >8 &#215; 10<sup>5</sup></th><th align="center" valign="middle" >10 &#215; 10<sup>5</sup></th></tr></thead><tr><td align="center" valign="middle" >FCC</td><td align="center" valign="middle" >4</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >13</td><td align="center" valign="middle" >13</td><td align="center" valign="middle" >5</td><td align="center" valign="middle" >12</td></tr><tr><td align="center" valign="middle" >HCP</td><td align="center" valign="middle" >56</td><td align="center" valign="middle" >55</td><td align="center" valign="middle" >54</td><td align="center" valign="middle" >58</td><td align="center" valign="middle" >47</td><td align="center" valign="middle" >60</td></tr><tr><td align="center" valign="middle" >BCC</td><td align="center" valign="middle" >2</td><td align="center" valign="middle" >4</td><td align="center" valign="middle" >1</td><td align="center" valign="middle" >7</td><td align="center" valign="middle" >9</td><td align="center" valign="middle" >6</td></tr><tr><td align="center" valign="middle" >Amor</td><td align="center" valign="middle" >1938</td><td align="center" valign="middle" >1926</td><td align="center" valign="middle" >1932</td><td align="center" valign="middle" >1922</td><td align="center" valign="middle" >1939</td><td align="center" valign="middle" >1922</td></tr></tbody></table></table-wrap><p>polyethylene has a cube shape (<xref ref-type="fig" rid="fig2">Figure 2</xref>(a)-(d)) with the number of structural units is 4 FCC, 56 HCP, 2 BCC, 1938 Amor (<xref ref-type="table" rid="table1">Table 1</xref>). When increasing moving the number of steps from 0 to 10<sup>6</sup> of the MD simulation leading to PE changing from the cube shape to the rectangular box shape (Figures 3(a)-(f)), and the of number structural units of FCC, HCP, BCC, Amor changes corresponding (<xref ref-type="table" rid="table1">Table 1</xref>). When increasing moving the number of steps of the MD leading to the number of structural units unchanged. Particularly, the shape has a huge change raising the question after compressing the PE time of the z-axis, the PE’s shape has changed leading to changing the plastic deformation characteristics of the PE. To confirm that studying the plastic deformation characteristics with different moving the number of steps, the results shown in <xref ref-type="fig" rid="fig4">Figure 4</xref>, <xref ref-type="table" rid="table2">Table 2</xref>.</p><p>The results show that the number of structural units with the atomic number (N), N = 2000 atoms is 12 FCC, 60 HCP, 6 BCC, and the characteristics of the plastic deformation include the bonding energy between atoms, E<sub>bond</sub> which is shown by the red color line, E<sub>angle</sub> is angular bond energy shown by the blue color line, the E<sub>dihed</sub> is energy dihedral shown by the blue color line, E<sub>total</sub> shown by the purple color line, (<xref ref-type="fig" rid="fig4">Figure 4</xref>(a), <xref ref-type="table" rid="table2">Table 2</xref>). When increasing N from N = 2000 atoms to N = 4000 atoms, 6000 atoms, 8000 atoms and 10,000 atoms leads to the total energy pair (E<sub>pair</sub>) decreases from E<sub>pair</sub> = −2756 eV to E<sub>pair</sub> = −13,866 eV (<xref ref-type="fig" rid="fig4">Figure 4</xref>(b)), energy bond (E<sub>bond</sub>) increases from E<sub>bond</sub> = 163 eV to E<sub>bond</sub> = 812 eV (<xref ref-type="fig" rid="fig4">Figure 4</xref>(c)), angular bond energy E<sub>angle</sub> increases from E<sub>angle</sub> = 256 eV to E<sub>angle</sub> = 1264 eV (<xref ref-type="fig" rid="fig4">Figure 4</xref>(d)), the energy dihedral increases from E<sub>dihed</sub> = 751 eV to E<sub>dihed</sub> = 3899 eV (<xref ref-type="fig" rid="fig4">Figure 4</xref>(e)), and E<sub>total</sub> decreases from E<sub>total</sub> = −1586 eV to E<sub>total</sub> = −7891 eV (<xref ref-type="fig" rid="fig4">Figure 4</xref>(f)), free volume change the number of atoms (<xref ref-type="fig" rid="fig4">Figure 4</xref>(g)), the plastic deformation process of PE (<xref ref-type="fig" rid="fig4">Figure 4</xref>(h)), the PE shape (<xref ref-type="fig" rid="fig4">Figure 4</xref>(i)) after deformation at T = 100 K, and the number of structural units of FCC</p><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> The process changes the number of structural units with the different number of MD moving steps</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Atoms number (atoms)</th><th align="center" valign="middle" >2 &#215; 10<sup>3</sup></th><th align="center" valign="middle" >4 &#215; 10<sup>3 </sup></th><th align="center" valign="middle" >6 &#215; 10<sup>3</sup></th><th align="center" valign="middle" >8 &#215; 10<sup>3</sup></th><th align="center" valign="middle" >10 &#215; 10<sup>3</sup></th></tr></thead><tr><td align="center" valign="middle" >FCC</td><td align="center" valign="middle" >12</td><td align="center" valign="middle" >19</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >37</td><td align="center" valign="middle" >43</td></tr><tr><td align="center" valign="middle" >HCP</td><td align="center" valign="middle" >60</td><td align="center" valign="middle" >112</td><td align="center" valign="middle" >162</td><td align="center" valign="middle" >219</td><td align="center" valign="middle" >265</td></tr><tr><td align="center" valign="middle" >BCC</td><td align="center" valign="middle" >6</td><td align="center" valign="middle" >11</td><td align="center" valign="middle" >16</td><td align="center" valign="middle" >24</td><td align="center" valign="middle" >28</td></tr><tr><td align="center" valign="middle" >Amor</td><td align="center" valign="middle" >1922</td><td align="center" valign="middle" >3858</td><td align="center" valign="middle" >5804</td><td align="center" valign="middle" >7720</td><td align="center" valign="middle" >9664</td></tr></tbody></table></table-wrap><p>increases from 12 FCC to 43 FCC, HCP increases from 60 HCP to 265 HCP, BCC increases from 6 BCC to 28 BCC, finishes increasing the number of structural units of FCC, BCC, which is not significant, only HCP increases rapidly (<xref ref-type="table" rid="table2">Table 2</xref>). Consequently, when increasing the atoms number and the number of shift steps of MD leads to a rapid increase in shape and the number of structural units of FCC, and the plastic deformation energy of PE also varies greatly. The result of the PE modeling process is consistent with the result [<xref ref-type="bibr" rid="scirp.101256-ref77">77</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref78">78</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref79">79</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref80">80</xref>] and coincide with the previous authors who used the Monte Carlo (MC) method [<xref ref-type="bibr" rid="scirp.101256-ref62">62</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref63">63</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref64">64</xref>] with a PE transition temperature is 103 K [<xref ref-type="bibr" rid="scirp.101256-ref75">75</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref76">76</xref>]. Additionally, when increasing the number of the atoms leads to the angle among the atoms is a constant corresponding to 109.5˚, the length of the link r increases from r = 1.529 &#197; to r = 1.558 &#197;, the obtained result is correctly consistent with the result of bonding angle of 109.27˚, and the link length r = 1.529 &#197; [<xref ref-type="bibr" rid="scirp.101256-ref62">62</xref>] [<xref ref-type="bibr" rid="scirp.101256-ref77">77</xref>], the size of the PE material increase from l = 3.73 nm to l = 6.63 nm, the total energy E<sub>total</sub> decreases from E<sub>total</sub> = −1586 eV to E<sub>total</sub> = −7891 eV. This means that when increasing the number the atoms leads to increase the link length, E<sub>total</sub> decreases and changes the plastic deformation characteristics of PE.</p></sec><sec id="s3_1_3"><title>3.1.3. The Effect of Annealing Time</title><p>Similarly, the effect of annealing time of PE material with N = 10,000 atoms at T = 100 K, the results are shown in Figures 5-7.</p><p>The results show that with t = 50 ps, the shape (<xref ref-type="fig" rid="fig6">Figure 6</xref>(a)), the number of structural units is 54 FCC, 280 HCP, 35 BCC (<xref ref-type="fig" rid="fig7">Figure 7</xref>(a)), the plastic deformation characteristics of PE (<xref ref-type="fig" rid="fig5">Figure 5</xref>(a)). When increasing the annealing time from t = 50 ps to t = 100 ps, 150 ps, 200 ps lead to FCC, HCP, BCC decreases and Amor increases accordingly: with t = 50 ps, there are 54 FCC, 280 HCP, 35 BCC, 9581 Amor; t = 100 ps has 43 FCC, 265 HCP, 28 BCC, 9564 Amor; t = 150 ps has 51 FCC, 268 HCP, 23 BCC, 9508 Amor; t = 200 ps has 42 FCC, 278 HCP, 19 BCC, 9461 Amor (Figures 7(b)-(d)), shape (Figures 6(b)-(d)), and the plastic deformation characteristics (Figures 5(b)-(d)). Also, E<sub>tot</sub> increased (<xref ref-type="fig" rid="fig5">Figure 5</xref>(e)), free volume change the number of atoms (<xref ref-type="fig" rid="fig5">Figure 5</xref>(f)). This showed that after the annealing time, then FCC, HCP, BCC decreased, Amor, increased after finishing which did not make a significant change in the structure.</p></sec></sec><sec id="s3_2"><title>3.2. Influence of Temperature</title><p>The result of the effect of T on the plastic deformation of PE 10,000 atoms, is shown in <xref ref-type="fig" rid="fig8">Figure 8</xref>, <xref ref-type="fig" rid="fig9">Figure 9</xref>.</p><p>The result shows that at the temperature (T), T = 40 K in which the number of structural units 47 FCC, 307 HCP, 18 BCC (<xref ref-type="fig" rid="fig9">Figure 9</xref>(a)) corresponding to the plastic deformation characteristics of PE (<xref ref-type="fig" rid="fig8">Figure 8</xref>). When increasing the temperature from T = 40 K to T = 60 K, 80 K, 100 K, 120 K, then the number of structural units of FCC, HCP, BCC decreases, and Amor increases accordingly with T = 40 K, has 47 FCC, 307 HCP, 18 BCC, 9628 Amor; T = 60 K, which has 53 FCC, 267 HCP, 33 BCC, 9647 Amor; T = 80 K has 56 FCC, 295 HCP, 30 BCC, 9619 Amor; T = 100 K has 43 FCC, 265 HCP, 28 BCC, 9664 Amor; T = 120 K has 39 FCC, 303 HCP, 18 BCC, 9640 Amor (Figures 9(b)-(e)), the shape and plastic deformation characteristics of PE (Figures 8(a)-(f)). In addition, the E<sub>tot</sub> increases (<xref ref-type="fig" rid="fig5">Figure 5</xref>(e)), which shows that when increasing temperature leads to the plastic deformation increases, and the structure is unchangeable. The obtained result shows that when increasing N leads to l increasing, E<sub>tot</sub> decreases, and the number of structural units increases. When increasing the time of elongation and temperature, l increases, E<sub>tot</sub> increases, and the number of structural units of the system decrease. This result is the basis for future empirical research.</p></sec></sec><sec id="s4"><title>4. Conclusion</title><p>After studying the effect of the atomic number (N), temperature (T), and annealing time (t) on the structure and the plastic deformation of the polyethylene, the result shows that when increasing N, from N = 2000 atoms to N = 10,000 atoms, the moving number of MD leads to the shape and the number of structure units FCC increase. The angle among the atoms is a constant corresponding to 109.5<sup>0</sup>. The length of the link r increases from r = 1.529 &#197; to r = 1.558 &#197;. The plastic deformation energy of PE has an enormous change as the bonding angle of 109.27<sup>0</sup>. The length of the link r = 1.529 &#197;, and the size of the PE material increases from l = 3.73 nm to l = 6.63 nm. The total energy (E<sub>total</sub>) decreases from E<sub>total</sub> = −1586 eV to E<sub>total</sub> = −7891 eV, and it coincides with the previous authors who used the Monte Carlo (MC) method with a PE transition temperature is 103 K. When N increasing leads to the length of the link increases, E<sub>total</sub> decreases, FCC, HCP, BCC, Amor increases, and changes the plastic deformation characteristics of PE with an increase in T and the t. The obtained results are very significant for future experimental research as studying the effect of the number of structural units on the structure, plastic deformation, conductivity, magnetism of PE materials.</p></sec><sec id="s5"><title>Acknowledgements</title><p>We thank computer room, Faculty of Physics of Hanoi National University of Education has created all favorable conditions, help us throughout the process of calculating, simulating and finishing the content of the article.</p></sec><sec id="s6"><title>Conflicts of Interest</title><p>The authors declare no conflicts of interest regarding the publication of this paper.</p></sec><sec id="s7"><title>Cite this paper</title><p>Trong, D.N., Quoc, T.T., Minh, H.D.T., Chinh, C.N. and Quoc, V.D. (2020) Structure, Plastic Deformation of Polyethylene: A Molecular Dynamics Method. 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