Computational Identification of Conserved microRNAs and Their Targets in Tea (Camellia sinensis)

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American Journal of Plant Sciences

ISSN Print: 2158-2742
ISSN Online: 2158-2750
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E-mail: ajps@scirp.org

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"Computational Identification of Conserved microRNAs and Their Targets in Tea (Camellia sinensis)"
written by Akan Das, Tapan Kumar Mondal,
published by American Journal of Plant Sciences, Vol.1 No.2, 2010

has been cited by the following article(s):

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[2]	Hidden players in the regulation of secondary metabolism in tea plant: focus on non-coding RNAs
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[13]	Identification of miRNA, their targets and miPEPs in peanut (Arachis hypogaea L.)
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[14]	Genome-wide investigation of superoxide dismutase (SOD) gene family and their regulatory miRNAs reveal the involvement in abiotic stress and hormone response in …
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[15]	In silico determination of transposon-derived miRNAs and targets in Aegilops species
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[16]	Genome-wide investigation of superoxide dismutase (SOD) gene family and their regulatory miRNAs reveal the involvement in abiotic stress and hormone …
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[18]	Understanding Response of Tea Plants to Heat Stress and the Mechanisms of Adaptation
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[19]	Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in tea plant (Camellia sinensis L.)
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[20]	Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing …
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[24]	Functional Roles of microRNAs in Agronomically Important Plants—Potential as Targets for Crop Improvement and Protection
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[37]	Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis)
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[51]	Identification of miRNAs and their potential targets in halophyte plant Thellungiella halophila
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[55]	Identification of differentially expressed gene profiles in young roots of tea [Camellia sinensis (L.) O. Kuntze] subjected to drought stress using suppression subtractive hybridization
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[56]	基于SVM 的microRNA 计算识别方法研究
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[57]	Identification of Differentially Expressed Gene Profiles in Young Roots of Tea [Camellia sinensis (L.) O. Kuntze] Subjected to Drought Stress Using Suppression …
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[58]	ÔØ Å ÒÙ× Ö ÔØ
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[1]	Flowering onset time is regulated by microRNA-mediated trehalose-6-phosphate signaling in Cajanus cajan L. under elevated CO2 Physiology and Molecular Biology of Plants, 2024 DOI:10.1007/s12298-024-01434-9

[2]	Flowering onset time is regulated by microRNA-mediated trehalose-6-phosphate signaling in Cajanus cajan L. under elevated CO2 Physiology and Molecular Biology of Plants, 2024 DOI:10.1007/s12298-024-01434-9

[3]	Biosynthesis of Natural Products in Plants 2024 DOI:10.1007/978-981-97-2166-5_4

[4]	Hidden players in the regulation of secondary metabolism in tea plant: focus on non-coding RNAs Beverage Plant Research, 2022 DOI:10.48130/BPR-2022-0019

[5]	Hidden players in the regulation of secondary metabolism in tea plant: focus on non-coding RNAs Beverage Plant Research, 2022 DOI:10.48130/BPR-2022-0019

[6]	Understanding the role of miRNAs for improvement of tea quality and stress tolerance Journal of Biotechnology, 2021 DOI:10.1016/j.jbiotec.2020.12.019

[7]	A Comprehensive Plant microRNA Simple Sequence Repeat Marker Database to Accelerate Genetic Improvements in Crops Agronomy, 2021 DOI:10.3390/agronomy11112298

[8]	Microarray analysis of Arabidopsis thaliana exposed to single and mixed infections with Cucumber mosaic virus and turnip viruses Physiology and Molecular Biology of Plants, 2021 DOI:10.1007/s12298-021-00925-3

[9]	A Comprehensive Plant microRNA Simple Sequence Repeat Marker Database to Accelerate Genetic Improvements in Crops Agronomy, 2021 DOI:10.3390/agronomy11112298

[10]	Understanding the role of miRNAs for improvement of tea quality and stress tolerance Journal of Biotechnology, 2021 DOI:10.1016/j.jbiotec.2020.12.019

[11]	Tea: Genome and Genetics 2020 DOI:10.1007/978-981-15-8868-6_1

[12]	Tea: Genome and Genetics 2020 DOI:10.1007/978-981-15-8868-6_6

[13]	Tea: Genome and Genetics 2020 DOI:10.1007/978-981-15-8868-6_8

[14]	Biotechnological Progress and Beverage Consumption 2020 DOI:10.1016/B978-0-12-816678-9.00004-7

[15]	Genome wide in-silico miRNA and target network prediction from stress responsive Horsegram (Macrotyloma uniflorum) accessions Scientific Reports, 2020 DOI:10.1038/s41598-020-73140-x

[16]	In silico determination of transposon-derived miRNAs and targets in Aegilops species Journal of Biomolecular Structure and Dynamics, 2020 DOI:10.1080/07391102.2019.1654409

[17]	Genome wide in-silico miRNA and target network prediction from stress responsive Horsegram (Macrotyloma uniflorum) accessions Scientific Reports, 2020 DOI:10.1038/s41598-020-73140-x

[18]	Genome-wide investigation of superoxide dismutase (SOD) gene family and their regulatory miRNAs reveal the involvement in abiotic stress and hormone response in tea plant (Camellia sinensis) PLOS ONE, 2019 DOI:10.1371/journal.pone.0223609

[19]	Identification of miRNA, their targets and miPEPs in peanut (Arachis hypogaea L.) Computational Biology and Chemistry, 2019 DOI:10.1016/j.compbiolchem.2019.107100

[20]	Tissue specific long non-coding RNAs are involved in aroma formation of black tea Industrial Crops and Products, 2019 DOI:10.1016/j.indcrop.2019.03.020

[21]	Computational identification and characterization of conserved miRNAs and their putative target genes in Eclipta prostrata Gene Reports, 2018 DOI:10.1016/j.genrep.2018.03.020

[22]	Identification of miRNAs and target genes regulating catechin biosynthesis in tea ( Camellia sinensis ) Journal of Integrative Agriculture, 2018 DOI:10.1016/S2095-3119(17)61654-X

[23]	Stress Physiology of Tea in the Face of Climate Change 2018 DOI:10.1007/978-981-13-2140-5_2

[24]	In Silico Identification of Conserved MiRNAs from Physcomitrella patens ESTs and their Target Characterization Current Bioinformatics, 2018 DOI:10.2174/1574893612666170530081523

[25]	Extrapolative microRNA precursor based SSR mining from tea EST database in respect to agronomic traits BMC Research Notes, 2017 DOI:10.1186/s13104-017-2577-x

[26]	Identification of drought-responsive miRNAs and physiological characterization of tea plant (Camellia sinensis L.) under drought stress BMC Plant Biology, 2017 DOI:10.1186/s12870-017-1172-6

[27]	Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarray-based hybridization and genome survey scaffold sequences BMC Plant Biology, 2017 DOI:10.1186/s12870-017-1169-1

[28]	Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in tea plant (Camellia sinensis L.) Scientific Reports, 2017 DOI:10.1038/s41598-017-13692-7

[29]	Functional Roles of microRNAs in Agronomically Important Plants—Potential as Targets for Crop Improvement and Protection Frontiers in Plant Science, 2017 DOI:10.3389/fpls.2017.00378

[30]	Plant miRNAs found in human circulating system provide evidences of cross kingdom RNAi BMC Genomics, 2017 DOI:10.1186/s12864-017-3502-3

[31]	Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in tea plant (Camellia sinensis L.) Scientific Reports, 2017 DOI:10.1038/s41598-017-13692-7

[32]	Small RNA and degradome profiling reveals important roles for microRNAs and their targets in tea plant response to drought stress Physiologia Plantarum, 2016 DOI:10.1111/ppl.12477

[33]	Computational Identification, Target Prediction, and Validation of Conserved miRNAs in Insulin Plant (Costus pictus D. Don) Applied Biochemistry and Biotechnology, 2016 DOI:10.1007/s12010-015-1891-9

[34]	Biotechnological advances in tea (Camellia sinensis [L.] O. Kuntze): a review Plant Cell Reports, 2016 DOI:10.1007/s00299-015-1884-8

[35]	Small RNA and degradome profiling reveals important roles for microRNAs and their targets in tea plant response to drought stress Physiologia Plantarum, 2016 DOI:10.1111/ppl.12477

[36]	Identification and conformational analysis of putative microRNAs in Maruca vitrata (Lepidoptera: Pyralidae) Applied & Translational Genomics, 2015 DOI:10.1016/j.atg.2015.10.003

[37]	Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis) PLOS ONE, 2015 DOI:10.1371/journal.pone.0125031

[38]	Identification of Novel and Conserved miRNAs from Extreme Halophyte, Oryza coarctata, a Wild Relative of Rice PLOS ONE, 2015 DOI:10.1371/journal.pone.0140675

[39]	Genome-wide discovery of novel and conserved microRNAs in white shrimp (Litopenaeus vannamei) Molecular Biology Reports, 2015 DOI:10.1007/s11033-014-3740-2

[40]	Mining NGS transcriptomes for miRNAs and dissecting their role in regulating growth, development, and secondary metabolites production in different organs of a medicinal herb, Picrorhiza kurroa Planta, 2015 DOI:10.1007/s00425-015-2255-y

[41]	In silico identification, characterization and expression analysis of miRNAs in Cannabis sativa L. Plant Gene, 2015 DOI:10.1016/j.plgene.2015.03.003

[42]	Comprehensive genome-wide identification and expression profiling of foxtail millet [Setaria italica (L.)] miRNAs in response to abiotic stress and development of miRNA database Plant Cell, Tissue and Organ Culture (PCTOC), 2014 DOI:10.1007/s11240-014-0480-x

[43]	Differential expression of microRNAs in dormant bud of tea [Camellia sinensis (L.) O. Kuntze] Plant Cell Reports, 2014 DOI:10.1007/s00299-014-1589-4

[44]	Genomic resources for breeding crops with enhanced abiotic stress tolerance Plant Breeding, 2014 DOI:10.1111/pbr.12117

[45]	Breeding and Biotechnology of Tea and its Wild Species 2014 DOI:10.1007/978-81-322-1704-6_6

[46]	Agricultural Bioinformatics 2014 DOI:10.1007/978-81-322-1880-7_9

[47]	Identification and characterization of cold-responsive microRNAs in tea plant (Camellia sinensis) and their targets using high-throughput sequencing and degradome analysis BMC Plant Biology, 2014 DOI:10.1186/s12870-014-0271-x

[48]	Genomic resources for breeding crops with enhanced abiotic stress tolerance Plant Breeding, 2014 DOI:10.1111/pbr.12117

[49]	Agricultural Bioinformatics 2014 DOI:10.1007/978-81-322-1880-7_9

[50]	Structural, physiological, and biochemical profiling of tea plants under zinc stress Biologia plantarum, 2013 DOI:10.1007/s10535-012-0300-2

[51]	Structural, physiological, and biochemical profiling of tea plants under zinc stress Biologia plantarum, 2013 DOI:10.1007/s10535-012-0300-2

[52]	Structural, physiological, and biochemical profiling of tea plants under zinc stress Biologia plantarum, 2013 DOI:10.1007/s10535-012-0300-2

[53]	Identification of miRNAs and their targets in tea (Camellia sinensis) Journal of Zhejiang University SCIENCE B, 2013 DOI:10.1631/jzus.B1300006

[54]	OMICS Applications in Crop Science 2013 DOI:10.1201/b16352-14

[55]	Structural, physiological, and biochemical profiling of tea plantlets under zinc stress Biologia Plantarum, 2013 DOI:10.1007/s10535-012-0300-2

[56]	Identification of Differentially Expressed Gene Profiles in Young Roots of Tea [Camellia sinensis (L.) O. Kuntze] Subjected to Drought Stress Using Suppression Subtractive Hybridization Plant Molecular Biology Reporter, 2012 DOI:10.1007/s11105-012-0422-x

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