The so-called “megasporophylls” of Ginkgoales, Coniferales, and Gnetales have been proven metamorphosed shoots, making “megasporophyll” of Cycas the last one resembling a leaf. Why and how it is so in Cycas (the most ancient seed plant dated back to the Palaeozoic) become key questions because their answers are hinged with the fates of several hypotheses in botany. Here, we performed a controlled developmental experiment on the ovulate parts (megasporophylls) in a single strobilus of Cycas sexseminifera. By removing the neighboring ones, two of the ovulate parts were left isolated spatially from others, in contrast to others left intact. A half-year-long continuous observation indicates that the isolated ovulate parts change their ovule arrangement from initial pinnate into helical pattern, while the intact ones in the same strobilus remain pinnate as usual. Since all ovulate parts are in the same strobilus and controlled by the same genome in this case and the only difference is lack of pressure from neighbors for the isolated ones, the changes in ovule orientation and ovulate part morphology can only be attributed to the lack of mechanical pressure among the ovulate parts. Therefore, we conclude that mechanical pressure, not genes, controls the morphology of ovulate parts and contributes to the leaf-like ovulate part morphology in Cycas. This conclusion cautions previous superficial interpretations of plant morphology.