[1]
|
Kohli, J., Kwong, T., Altruda, F., et al. (1979) Characterization of a UGA-suppressing serine tRNA from Schi-zosaccharomyces pombe with the help of a new in vitro assay system for eukaryotic suppressor tRNAs. Journal of Biological Chemistry, 254, 1546-1551.
|
[2]
|
Raftery, L.A., Egan, J.B., Cline, S.W., et al. (1984) Defined set of cloned termination suppressors: In vivo activity of isogenetic UAG, UAA, and UGA suppressor tRNAs. Journal of Bacteriology, 158, 849-859.
|
[3]
|
Grundy, F.J. and Henkin, T.M. (1993) tRNA as a positive regulator of transcription antitermination in B. subtilis. Cell, 74, 475-482. doi:10.1016/0092-8674(93)80049-K
|
[4]
|
Ryu, Y. and Schultz, P.G. (2006) Efficient incorporation of unnatural amino acids into proteins in Escherichia coli. Nature Methods, 3, 263-265. doi:10.1038/nmeth864
|
[5]
|
Cremer, K.J., Bodemer, M., Summers, W.P., S et al. (1979) In vitro suppression of UAG and UGA mutants in the thymidine kinase gene of herpes simplex virus. Proceedings of the National Academy of Sciences USA, 76, 430-434. doi:10.1073/pnas.76.1.430
|
[6]
|
K?hrer, C., Yoo, J.H., Bennett, M., et al. (2003) A possible approach to site-specific insertion of two different unnatural amino acids into proteins in mammalian cells via nonsense suppression. Chemistry & Biology, 10, 1095-1102. doi:10.1016/j.chembiol.2003.10.013
|
[7]
|
Tuite, M.F., Cox, B.S. and McLaughlin, C.S. (1983) In vitro nonsense suppression in [psi+] and [psi-] cell-free lysates of Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences USA, 80, 2824-2828.
doi:10.1073/pnas.80.10.2824
|
[8]
|
Tuite, M.F., Cox, B.S. and McLaughlin C.S. (1981) An homologous in vitro assay for yeast nonsense suppressors. Journal of Biological Chemistry, 256, 7298-304.
|
[9]
|
Bare, L.A. and Uhlenbeck, O.C. (1986) Specific substitution into the anticodon loop of yeast tyrosine transfer RNA. Biochemistry, 25, 5825-5830.
doi:10.1021/bi00367a072
|
[10]
|
Carrier, M.J. and Buckingham, R.H.(1984)An effect of codon context on the mistranslation of UGU codons in vitro. Journal of Molecular Biology, 175, 29-38.
doi:10.1016/0022-2836(84)90443-1
|
[11]
|
Kubli, E., Schmidt, T., Martin, P.F., et al. (1982) In vitro suppression of a nonsense mutant of Drosophila mela-nogaster. Nucleic Acids Res, 10, 7145-7152.
doi:10.1093/nar/10.22.7145
|
[12]
|
Bain, J.D., Diala, E.S., Glabe, C.G., et al. (1991) Chamberlin AR. Site-specific incorporation of nonnatural residues during in vitro protein biosynthesis with semisynthetic aminoacyl-tRNAs. Biochemistry, 30, 5411-5421.
doi:10.1021/bi00236a013
|
[13]
|
Rossi, J.J., Schold, M., Larson, G.P., et al. (1982) Functional expression of a yeast ochre suppressor tRNA gene in Escherichia coli. Gene, 20, 423-432.
doi:10.1016/0378-1119(82)90211-6
|
[14]
|
Rydén, S.M. and Isaksson, L.A. (1984) A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA nonsense suppressors. Molecular and General Genetics, 193, 38-45. doi:10.1007/BF00327411
|
[15]
|
Raftery, L.A., and Yarus, M. (1985) Site-specific muta-genesis of Escherichia coli gltT yields a weak, glutamic acid-inserting ochre suppressor. Journal of Molecular Biology, 184, 343-345. doi:10.1016/0022-2836(85)90385-7
|
[16]
|
Leinfelder, W., Zehelein, E., Mandrand-Berthelot, M.A., et al. (1988)Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine. Nature, 331, 723-725. doi:10.1038/331723a0
|
[17]
|
Kleina, L.G., Masson, J.M., Normanly, J., et al. (1990) Construction of Escherichia coli amber suppressor tRNA genes. II. Synthesis of additional tRNA genes and improvement of suppressor efficiency. Journal of Molecular Biology, 213, 705-717.
doi:10.1016/S0022-2836(05)80257-8
|
[18]
|
Buckingham, R.H., S?rensen, P., Pagel, F.T., et al. (1990) Third position base changes in codons 5’ and 3’ adjacent UGA codons affect UGA suppression in vivo. Biochimica et Biophysica Acta, 1050, 259-262.
doi:10.1016/0167-4781(90)90177-4
|
[19]
|
Hottinger, H., Pearson, D., Yamao, F., et al. (1982) Nonsense suppression in Schizosaccharomyces pombe: The S. pombe Sup3-e tRNASerUGA gene is active in S. cerevisiae. Molecular and General Genetics, 188, 219-224.
doi:10.1007/BF00332678
|
[20]
|
Hottinger, H., Stadelmann, B., Pearson,D.et al. (1984) The Schizosaccharomyces pombe sup3-i suppressor recognizes ochre, but not amber codons in vitro and in vivo. EMBO Journal, 3, 423-428.
|
[21]
|
Pearson, D., Willis, I., Hottinger, H., et al. (1985) Mutations preventing expression of sup3 tRNASer nonsense suppressors of Schizosaccharomyces pombe. Molecular and Cellular Biology, 5, 808-815.
|
[22]
|
Krupp, G., Thurianx, P., Willis, I., et al. (1985) First identification of an amber nonsense mutation in Schi- zosaccharomyces pombe: Major differences in the efficiency of homologous versus heterologous yeast suppressor tRNA genes. Molecular and General Genetics, 201, 82-87. doi:10.1007/BF00397990
|
[23]
|
Strobel, M.C. and Abelson, J. (1986) Effect of intron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo. Molecular and Cellular Biology, 6, 2663-2673.
|
[24]
|
Pure, G.A., Robinson, G.W., Naumovski, L., et al. (1985) Partial suppression of an ochre mutation in Saccharomyces cerevisiae by multicopy plasmids containing a normal yeast tRNAGln gene. Journal of Molecular Biology, 183, 31-42. doi:10.1016/0022-2836(85)90278-5
|
[25]
|
Pappu, S.S., Roy, K.L. and Bell J.B. (1990) Drosophila melanogaster tRNA(Ser) suppressor genes function with strict codon specificity when introduced into Saccharomyces cerevisiae. Gene, 91, 255-259.
doi:10.1016/0378-1119(90)90096-A
|
[26]
|
Kim, D. and Johnson, J. (1988) Construction, expression, and function of a new yeast amber suppressor, tRNATrpA. Journal of Biological Chemistry, 263, 7316-7321.
|
[27]
|
Kim, D., Raymond, G.J., Clark, S.D., et al. (1990) Yeast tRNATrp genes with anticodons corresponding to UAA and UGA nonsense codons. Nucleic Acids Research, 18, 4215-4221. doi:10.1093/nar/18.14.4215
|
[28]
|
Edelman, I. and Culbertson, M.R. (1991) Exceptional codon recognition by the glutamine tRNAs in Saccharomyces cerevisiae. EMBO Journal, 10, 1481-1491.
|
[29]
|
Murina, O.A., Moskalenko, S.E. and Zhuravleva, G.A. (2010) Overexpression of genes encoding tRNA(Tyr) AND tRNA(Gln) improves viability of nonsense mutants in SUP45 gene in yeast Saccharomyces cerevisiae. Molecular Biology, 44, 301-310.
|
[30]
|
Doerig, R.E., Suter, B., Gray, M., et al. (1988) Identification of an amber nonsense mutation in the rosy516 gene by germline transformation of an amber suppressor tRNA gene. EMBO Journal, 7, 2579-2584.
|
[31]
|
Washburn, T. and O’Tousa, J.E. (1992) Nonsense suppression of the major rhodopsin gene of Drosophila. Genetics, 130, 585-595.
|
[32]
|
Bienz, M., Kubli, E., Kohli, J., et al. (1980) Nonsense suppression in eukaryotes: The use of the Xenopus oocyte as an in vivo assay system. Nucleic Acids Research, 8, 5169-5178. doi:10.1093/nar/8.22.5169
|
[33]
|
Hudziak, R.M., Laski, F.A., RajBhandary, U.L., et al. (1982) Establishment of mammalian cell lines containing multiple nonsense mutations and functional suppressor tRNA genes. Cell, 31, 137-146.
doi:10.1016/0092-8674(82)90413-5
|
[34]
|
Laski, F.A., Belagaje, R., Hudziak, R.M.,et al. (1984) Synthesis of an ochre suppressor tRNA gene and expression in mammalian cells. EMBO Journal, 3, 2445-2452.
|
[35]
|
White, B.T. and McGeoch, D.J. (1987) Isolation and characterization of conditional lethal amber nonsense mutants of vesicular stomatitis virus. Journal of General Virology, 68, 3033-3044.
doi:10.1099/0022-1317-68-12-3033
|
[36]
|
Summers, W.P., Summers, W.C, Laski, F.A., et al. (1983) Functional suppression in mammalian cells of nonsense mutations in the herpes simplex virus thymidine kinase gene by suppressor tRNA genes. Journal of Virology, 47, 376-379.
|
[37]
|
Young, J.F., Capecchi, M., Laski, F.A., et al. (1983) Measurement of suppressor transfer RNA activity. Science, 221, 873-875. doi:10.1126/science.6308765
|
[38]
|
Capone, J.P., Sedivy,. J.M., Sharp, P.A., et al. (1986) Introduction of UAG, UAA, and UGA nonsense mutations at a specific site in the Escherichia coli chloramphenicol acetyltransferase gene: Use in measurement of amber, ochre, and opal suppression in mammalian cells. Molecular and Cellular Biology, 6, 3059-3067.
|
[39]
|
Sedivy, J.M., Capone, J.P., RajBhandary, U.L., et al. (1987) An inducible mammalian amber suppressor: Propagation of a po-liovirus mutant. Cell, 50, 379-389.
doi:10.1016/0092-8674(87)90492-2
|
[40]
|
Capone, J.P. (1988) Modulation of the phenotypic expression of a human serine tRNA gene by 5’-flanking sequences. DNA, 7, 459-468.
doi:10.1089/dna.1.1988.7.459
|
[41]
|
Syroid, D. E., Tapping, R.I., and Capone, J.P. (1992) Regulated expression of a mammalian nonsense suppressor tRNA gene in vivo and in vitro using the lac operator/repressor system. Molecular and Cellular Biology, 12, 4271-4278.
|
[42]
|
Drabkin, H.J., Park, H.J. and RajBhandary, U.L. (1996) Amber suppression in mammalian cells dependent upon expression of an Escherichia coli aminoacyl-tRNA synthetase gene. Molecular and Cellular Biology, 16, 907- 913.
|
[43]
|
Yu, W. and Spreitzer, R.J. (1992) Chloroplast heteroplasmicity is stabilized by an amber-suppressor tryptophan tRNA(CUA). Proceedings of the National Academy of Sciences USA, 89, 3904-3907.
doi:10.1073/pnas.89.9.3904
|
[44]
|
Esposito, D., Higgs, D.C., Drager, R.G., et al. (2001) A nucleus-encoded suppressor defines a new factor which can promote petD mRNA stability in the chloroplast of Chlamydomonas reinhardtii. Current Genetics, 39, 40-48.
doi:10.1007/s002940000179
|
[45]
|
Murakami, S., Kuehnle, K. and Stern, D.B. (2005) A spontaneous tRNA suppressor of a mutation in the Chlamydomonas reinhardtii nuclear MCD1 gene required for stability of the chloroplast petD mRNA. Nucleic Acids Research, 33, 3372-3380. doi:10.1093/nar/gki651
|
[46]
|
Franklin. S., Lin, T.Y. and Folk, W.R. (1992) Construction and expression of nonsense suppressor tRNAs which function in plant cells. The Plant Journal, 2, 583-588.
|
[47]
|
Urban, C., Zerfass, K., Fingerhut, C., et al. (1996) UGA suppression by tRNACmCATrp occurs in diverse virus RNAs due to a limited influence of the codon context. Nucleic Acids Research, 24, 3424-3430.
doi:10.1093/nar/24.17.3424
|
[48]
|
Chen, Z., Ulmasov, B. and Folk, W.R. (1998) Nonsense and missense translational suppression in plant cells mediated by tRNA(Lys). Plant Molecular Biology, 36, 163- 170. doi:10.1023/A:1005996125011
|
[49]
|
Akama, K. and Beier, H. (2003) Translational nonsense codon suppression as indicator for functional pre-tRNA splicing in transformed Arabidopsis hypocotyl-derived calli. Nucleic Acids Research, 31, 1197-207.
doi:10.1093/nar/gkg220
|
[50]
|
Prescott, C.D. and Kornau, H.C. (1992) Mutations in E. coli 16s rRNA that enhance and decrease the activity of a suppressor tRNA. Nucleic Acids Research, 20, 1567- 1571. doi:10.1093/nar/20.7.1567
|
[51]
|
Szweykowska-Kulinska, Z. and Beier, H. (1991) Plant nonsense suppressor tRNA(Tyr) genes are expressed at very low levels in vitro due to inefficient splicing of the intron-containing pre-tRNAs. Nucleic Acids Research, 19, 707-712. doi:10.1093/nar/19.4.707
|
[52]
|
Belgrader, P., Cheng, J., and Maquat, L.E. (1993) Evidence to implicate translation by ribosomes in the me- chanism by which nonsense codons reduce the nuclear level of human triosephosphate isomerase mRNA. Proceedings of the National Academy of Sciences USA, 90, 482-486. doi:10.1073/pnas.90.2.482
|
[53]
|
Phillips-Jones, M.K., Watson, F.J. and Martin, R. (1993) The 3’ codon context effect on UAG suppressor tRNA is different in Escherichia coli and human cells. Journal of Molecular Biology, 233, 1-6.
doi:10.1006/jmbi.1993.1479
|
[54]
|
Tapping, R.I., Syroid, D.E., Bilan, P.T., et al. (1993) The 5’ flanking sequence negatively modulates the in vivo expression and in vitro transcription of a human tRNA gene. Nucleic Acids Research, 21, 4476-4482.
doi:10.1093/nar/21.19.4476
|
[55]
|
Le Goff, X., Philippe, M. and Jean-Jean, O. (1997) Overexpression of human release factor 1 alone has an antisuppressor effect in human cells. Molecular and Cellular Biology, 17, 3164-3172.
|
[56]
|
Janzen, D.M. and Geballe, A.P. (2004) The effect of eukaryotic release factor depletion on translation termination in human cell lines. Nucleic Acids Research, 32, 4491-502. doi:10.1093/nar/gkh791
|
[57]
|
Ilegems, E., Pick, H.M. and Vogel, H.(2004) Downregulation of eRF1 by RNA interference increases mis- acylated tRNA suppression efficiency in human cells. Protein Engineering, Design and Selection, 17, 821-827.
doi:10.1093/protein/gzh096
|
[58]
|
Liang, S., Briggs, M.W. and Butler, J.S. (1997) Regulation of tRNA suppressor activity by an intron-encoded polyadenylation signal. RNA, 3, 648-659.
|
[59]
|
Niederberger, C., Gr?ub, R., Costa, A., et al. (1999) The tRNA N2,N2-dimethylguanosine-26 methyltransferase encoded by gene trm1 increases efficiency of suppression of an ochre codon in Schizosaccharomyces pombe. FEBS Letters, 464, 67-70.
doi:10.1016/S0014-5793(99)01679-8
|
[60]
|
Swanson, R., Hoben, P., Sumner-Smith, M., et al. (1988) Accuray of in vivo aminoacylation requires proper balance of tRNA and aminoacyl-tRNA synthetase. Science, 242, 1548-1551. doi:10.1126/science.3144042
|
[61]
|
McClain, W.H., Chen, Y.M., Foss, K., et al. (1988) Association of transfer RNA acceptor identity with a helical irregularity. Science, 243, 1256.
doi:10.1126/science.243.4896.1256-b
|
[62]
|
Normanly, J., Kleina, L.G., Masson, J.M., et al. (1990) Construction of E. coli amber suppressor tRNA genes. III. Determination of tRNA specifity. Journal of Molecular Biology, 213, 719-726.
doi:10.1016/S0022-2836(05)80258-X
|
[63]
|
McClain, W.H., Foss, K., Jenkins, R.A., et al. (1990) Nucleotides that determine Escherichia coli tRNA(Arg) and tRNA(Lys) acceptor identities revealed by analyses of mutant opal and amber suppressor tRNAs. Proceedings of the National Academy of Sciences USA, 87, 9260-9264. doi:10.1073/pnas.87.23.9260
|
[64]
|
K?hrer, C., Xie, L., Kellerer, S., et al. (2001) Import of amber and ochre suppressor tRNAs into mammalian cells: A general approach to site-specific insertion of amino acid analogues into proteins. Proceedings of the National Academy of Sciences USA, 98, 14310-14315.
doi:10.1073/pnas.251438898
|
[65]
|
Trecartin, R.F., Liebhaber, S.A., Chang, J.C., et al. (1981) beta zero thalassemia in Sardinia is caused by a nonsense mutation. J Clin Invest, 68, 1012-1017.
doi:10.1172/JCI110323
|
[66]
|
Temple, G.F., Dozy, A.M., Roy, K.L., et al. (1982) Construction of a functional human suppressor tRNA gene: an approach to gene therapy for beta-thalassaemia. Nature, 296, 537-540. doi:10.1038/296537a0
|
[67]
|
Atkinson, J. and Martin, R. (1994) Mutations to nonsense codons in human genetic disease: Implications for gene therapy by nonsense suppressor tRNAs. Nucleic Acids Research, 22, 1327-1334. doi:10.1093/nar/22.8.1327
|
[68]
|
Robinson, D.F. and Maxwell, I.H. (1995) Suppression of single and double nonsense mutations introduced into the diphtheria toxin A-chain gene: A potential binary system for toxin gene therapy. Human Gene Therapy, 6, 137-143.
doi:10.1089/hum.1995.6.2-137
|
[69]
|
Kiselev, A.V., Ostapenko, O.V., Rogozhkina, E.V., et al. (2002) Suppression of nonsense mutations in the Dystrophin gene by a suppressor tRNA gene. Molecular Biology, 36, 43-47.
|
[70]
|
Li, K., Zhang, J., Buvoli, M., et al. (1997) Ochre suppressor transfer RNA restored dystrophin expression in mdx mice. Life Sciences, 61, 205-209.
doi:10.1016/S0024-3205(97)00714-5
|
[71]
|
Buvoli, M., Buvoli, A. and Leinwand, L.A. (2000) Suppression of nonsense mutations in cell culture and mice by multimerized suppressor tRNA genes. Molecular and Cellular Biology, 20, 3116-3124.
doi:10.1128/MCB.20.9.3116-3124.2000
|