Multimodal compression applied to biomedical data

Abstract

In this paper, we introduce a novel approach to compress jointly a medical image and a multichannel bio-signals (e.g. ECG, EEG). This technique is based on the idea of Multimodal Compression (MC) which requires only one codec instead of multiple codecs. Objectively, biosignal samples are merged in the spatial domain of the image using a specific mixing function. Afterwards, the whole mixture is compressed using JPEG 2000. The spatial mixing function inserts samples in low-frequency regions, defined using a set of operations, including down-sampling, interpolation, and quad-tree decomposition. The decoding is achieved by inverting the process using a separation function. Results show that this technique allows better performances in terms of Compression Ratio (CR) compared to approaches which encode separately modalities. The reconstruction quality is evaluated on a set of test data using the PSNR (Peak Signal Noise Ratio) and the PRD (Percent Root Mean Square Difference), respectively for the image and biosignals.

Share and Cite:

Zeybek, E. , Fournier, R. and Naït-Ali, A. (2012) Multimodal compression applied to biomedical data. Journal of Biomedical Science and Engineering, 5, 755-761. doi: 10.4236/jbise.2012.512094.

Conflicts of Interest

The authors declare no conflicts of interest.

References

[1] Cetin, A.E., Koymen, H. and Aydin, M.C. (1993) Multichannel ECG data compression by multirate signal processing and transform domain coding techniques. IEEE Transactions on Biomedical Engineering, 40, 495-499. doi:10.1109/10.243411
[2] Nave, G. and Cohen, A. (1993) ECG compression using long-term prediction. IEEE Transactions on Biomedical Engineering, 40, 877-885. doi:10.1109/10.245608
[3] Nait-Ali, A. and Cavaro-Menard, C. (2008) Compression of biomedical images and signals. Wiley, London.
[4] Emre, H., Zeybek, Amine, N.-A., Christian, O. and Ouled-Zaid, A. (2007) A novel scheme for joint multi-channel ECG-ultrasound image compression. Proceedings of Engineering in Medicine and Biology Society, 29th Annual International Conference of the IEEE, Lyon, 2007, 713-716.
[5] Na?t-Ali, A., Zeybek, E.H. and Drouot, X. (2009) Introduction to multimodal compression of biomedical data. Springer, Berlin, Heidelberg, 2009, pp. 353-375.
[6] Thévenaz, P. Blu, T. and Unser, M. (2000) Interpolation Revisited. IEEE Transactions on Medical Imaging, 19, 739-758.
[7] Finkel, R. and Bentley, J.L. (1974) Quadtrees: A data structure for retrieval on composite keys. Acta Informatica, 4, 1-9.
[8] Na?t-Ali, A., Cavaro-Menard, C. and Zeybek, E. (2007) MeDEISA. http://www.medeisa.net
[9] Batista, L., Melcher, E.U.K. and Carvalho, L.C. (2001) Compression of ECG signals by optimized quantization of discrete cosine transform coefficients. Medical Engineering & Physics, 23, 127-134. doi:10.1016/S1350-4533(01)00030-3

Copyright © 2024 by authors and Scientific Research Publishing Inc.

Creative Commons License

This work and the related PDF file are licensed under a Creative Commons Attribution 4.0 International License.