[1]
|
Smith , H.O. and Wilcox, K.W. (1970) A Restriction Enzyme from Hemophilus influenzae. I. Purification and General Properties. Journal of Molecular Biology, 51, 379-391. https://doi.org/10.1016/0022-2836(70)90149-X
|
[2]
|
Barrangou, R., Fremaux, C., Deveau, H., Richards, M., Boyaval, P., Moineau, S., Romero, D.A. and Horvath, P. (2007) CRISPR Provides Acquired Resistance against Viruses in Prokaryotes. Science, 315, 1709-1712.
https://doi.org/10.1126/science.1138140
|
[3]
|
Samson, J.E., Magadan, A.H., Sabri, M. and Moineau, S. (2013) Revenge of the Phages: Defeating Bacterial Defenses. Nature Review Microbiology, 11, 1044-1050.
|
[4]
|
Ishino, Y., Shinagawa, H., Makino, K., Amemura, M. and Nakata, A. (1987) Nucleotide Sequence of the iap Gene, Responsible for Alkaline Phosphatase Isozyme Conversion in Escherichia coli and Identification of the Gene Product. Journal of Bacteriology, 169, 5429-5433. https://doi.org/10.1128/jb.169.12.5429-5433.1987
|
[5]
|
Jackson, S.A., McKenzie, R.E., Fagerlund, R.D., Kieper, S.N., Fineran, P.C. and Brouns, S.J.J. (2017) CRISPR-Cas: Adapting to Change. Science, 356, eaal5056.
https://doi.org/10.1126/science.aal5056
|
[6]
|
Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J.A. and Charpentier, E. (2012) A Programmable Dual-RNA-guided DNA Endonuclease in Adaptive Bacterial Immunity. Science, 337, 816-821. https://doi.org/10.1126/science.1225829
|
[7]
|
Semenova, E., Jore, M.M., Datsenko, K.A., Semenova, A., Westra, E.R., Wanner, B., van der Oost, J., Brouns S.J.J. and Severinov, K. (2011) Interference by Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) RNA Is Governed by a Seed Sequence. Proceedings of National Academy of Science U.S.A., 108, 10098-10103. https://doi.org/10.1073/pnas.1104144108
|
[8]
|
Hsu, P.D., Scott, D.A., Weinstein, J.A., Ran, F.A., Konermann, S., Agarwala, V., Li, Y., Fine, E.J., Wu, X., Shalem, O., Cradick, T.J., Marraffini, L.A., Bao, G. and Zhang, F. (2013) DNA Targeting Specificity of RNA-guided Cas9 Nuclease. Nature Biotechnology, 31, 827-832. https://doi.org/10.1038/nbt.2647
|
[9]
|
Doudna, J.A. and Charpentier, E. (2014) The New Frontier of Genome Engineering with CRISPR-Cas9. Science, 346, Article ID: 1258096.
https://doi.org/10.1126/science.1258096
|
[10]
|
Cong, L., Ran, F.A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P.D., Wu, X., Jiang, W., Marraffini, L.A. and Zhang, F. (2013) Multiplex Genome Engineering via CRISPR/Cas Systems. Science, 339, 819-823.
https://doi.org/10.1126/science.1231143
|
[11]
|
Mohanraju, P., Makarova, K.S., Zetsche, B., Zhang, F., Koonin, E.V. and van der Oost, J. (2016) Diverse Evolutionary Roots and Mechanistic Variations of the CRISPR-Cas Systems. Science, 353, aad5147-1-12.
https://doi.org/10.1126/science.aad5147
|
[12]
|
Wiedenheft, B., Sternberg, S.H. and Doudna, J.A. (2012) RNA-Guided Genetic Silencing Systems in Bacteria and Archaea. Nature, 482, 331-338.
https://doi.org/10.1038/nature10886
|
[13]
|
Jiang, F., Taylor, D.W., Chen, J.S., Kornfeld, E., Zhou, K., Thompson, A.J., Nogales, E. and Doudna, J.A. (2016) Structures of a CRISPR-Cas9 R-Loop Complex Primed for DNA Cleavage. Science, 351, 867-871. https://doi.org/10.1126/science.aad8282
|
[14]
|
Slaymaker, I.M., Gao, L., Zetsche, B., Scott, D., Yan, W.X. and Zhang, F. (2016) Rationally Engineered Cas9 Nucleases with Improved Specificity. Science, 351, 84-88.
https://doi.org/10.1126/science.aad5227
|
[15]
|
Kleinstiver, B.P., Pattanayak, V., Prew, M.S., Tsai, S.Q., Nguyen, N.T., Zheng, Z. and Joung, J.K. (2016) High-Fidelity CRISPR-Cas9 Nucleases with No Genome-Wide Off-Target Effects. Nature, 529, 490-495.
https://doi.org/10.1038/nature16526
|
[16]
|
Chen, J.S., Dagdas, Y.S., Kleinstiver, B.P., Welch, M.M., Sousa, A.A., Harrington L.B., Sternberg, S.H., Joung J.K., Yildiz, A. and Doudna J.A. (2017) Enhanced Proofreading Governs CRISPR-Cas9 Targeting Accuracy. Nature, 550, 407-410.
https://doi.org/10.1038/nature24268
|
[17]
|
Kleinstiver, B.P., Tsai, S.Q., Prew, M.S., Ngueyen, N.T., Welch, M.M., Lopez, J.M., McCaw, Z.R., Aryee, M.J. and Joung, J.K. (2016) Genome-Wide Specificities of CRISPR-Cas Cpf1 Nucleases in Human Cells. Nature Biotechnology, 34, 863-868.
https://doi.org/10.1038/nbt.3620
|
[18]
|
Kim, D., Kim, J., Hur, J.K., Been, K.W., Yoon, S.-H. and Kim, J.S. (2016) Genome-Wide Analysis Reveals Specificities of Cpf1 Endonucleases in Human Cells. Nature Biotechnology, 34, 869-874. https://doi.org/10.1038/nbt.3609
|
[19]
|
Zetsche, B., Gootenberg J, Abudayyeh, O.O., Slaymaker, J.M., Makarova, K.S., Essletzbichler, P., Volz, S.E., Joung, J., van der Oost, J., Reev, A., Koonin, E.V. and Zhang, F. (2015) Cpf1 Is a Single RNA-guided Endonuclease of a Class 2 CRISPR-Cas System. Cell, 163, 759-771. https://doi.org/10.1016/j.cell.2015.09.038
|
[20]
|
Abudayyeh, O.O., Gootenberg, J.S., Konermann, S., Joung, J., Slaymaker, I.M., Cox, D.B.T., Shmakov, S., Makarova, K.S., Semenova, E., Minakhin, L., Severinov, K., Regev, A., Lander, E.S., Koonin, E.V. and Zhang, F. (2016) C2c2 Is a Single-Component Programmable RNA-Guided RNA-Targeting CRISPR Effector. Science, 353, aaf5573-1 to 8. https://doi.org/10.1126/science.aaf5573
|
[21]
|
Knight, S.C., Xie, L., Deng, W., Guglielmi, B., Witokowsky, L.B., Bosanac, L., Zhang, E.T., Beheiry, M.E., Masson, J.-B., Dahan, M., Liu, Z., Doudna, J.A. and Tjian, R. (2015) Dynamics of CRISPR-Cas9 Genome Interrogation in Living Cells. Science, 350, 823-826. https://doi.org/10.1126/science.aac6572
|
[22]
|
Jones, D.L., Leroy, P., Unoson, C., Fange, D., Curic, V., Lawson, M.J. and Elf, J. (2017) Kinetics of dCas9 Target Search in Escherichia coli. Science, 357, 1420-1424.
https://doi.org/10.1126/science.aah7084
|
[23]
|
Shan, Q., Wang, Y., Li, J., Zhang, Y., Chen, K., Liang, Z., Zhang, K., Liu, J., Xi, J.J., Qiu, J.-L. and Gao, C. (2013) Targeted Genome Modification of Crop Plants (Rice and Wheat) Using CRISPR-Cas System. Nature Biotechnology, 31, 686-688.
https://doi.org/10.1038/nbt.2650
|
[24]
|
Miao, J., Guo, D., Zhang, J., Huang, Q., Qin, G., Zhang, X., Wan, J., Gu, H. and Qu, L.-J. (2013) Targeted Mutagenesis in Rice Using CRISPR-Cas System. Cell Research, 23, 1233-1236. https://doi.org/10.1038/cr.2013.123
|
[25]
|
Li, J.-F., Norville, J.E., Aach, J., McCormack, M., Zhang, D., Bush, J., Church, G.M. and Sheen, J. (2013) Multiplex and Homologous Recombination-Meditated Genome Editing in Arabidospsis and Nicotiana benthamiana Using Guide RNA and Cas9. Nature Biotechnology, 31, 688-691. https://doi.org/10.1038/nbt.2654
|
[26]
|
Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J.D. and Kamoun, S. (2013) Targeted Mutagenesis in the Model Plant Nicotiana benthamiana Using Cas9 RNA-Guided Endonuclease. Nature Biotechnology, 31, 691-693.
https://doi.org/10.1038/nbt.2655
|
[27]
|
Woo, J.W., Kim, J., Kwon, S., Corvalan, C., Cho, S.W., Kim, H., Kim, S.-G., Kim, S.-T., Choe, S. and Kim, J.-S. (2015) DNA-Free Genome Editing in Plants with Preassembled CRISPR-Cas9 Ribonucleoproteins. Nature Biotechnology, 10, 1162-1164.
https://doi.org/10.1038/nbt.3389
|
[28]
|
Jiang, W., Zhou, H., Bi, H., Fromm, M., Yang, B. and Weeks, D.P. (2013) Demonstration of CRISPR/Cas9/sgRNA-Mediated Targeted Gene Modification in Arabidopsis, Tobacco, Sorghum and Rice. Nucleic Acid Research, 41, e188.
https://doi.org/10.1093/nar/gkt780
|
[29]
|
Nishizawa-Yokoi, A., Endo, M., Ohtsuki, N., Saika, H. and Toki, S. (2015) Precision Genome Editing in Plants via Gene Targeting and piggyBac-Mediated Marker Excision. The Plant Journal, 81, 160-168. https://doi.org/10.1111/tpj.12693
|
[30]
|
Endo, M., Mikami, M. and Toki, S. (2015) Biallelic Gene Targeting in Rice. Plant Physiology, 170, 667-677. https://doi.org/10.1104/pp.15.01663
|
[31]
|
Brooks, C., Nekrasov, V., Lippman, Z.B. and Van Eck, J. (2014) Efficient Gene Editing in Tomato in the First Generation Using the Clustered Regularly Interspaced Short Palindromic Repeats/CRISPR-Associated9 System. Plant Physiology, 166, 1292-1297. https://doi.org/10.1104/pp.114.247577
|
[32]
|
Svitashev, S., Young, J.K., Schwarz, C., Gao, H., Falco, S.C. and Cigan, A.M. (2015) Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize Using Cas9 and Guided RNA. Plant Physiology, 169, 931-945.
https://doi.org/10.1104/pp.15.00796
|
[33]
|
Li, Z., Liu, Z.-B., Xing, A., Moon, B.P., Koelihoffer, J.P., Huang, L., Ward, R.T., Clifton, E., Falco, S.C. and Cigan, A.M. (2015) Cas9-Guided RNA Directed Genome Editing in Soybean. Plant Physiology, 169, 960-970.
https://doi.org/10.1104/pp.15.00783
|
[34]
|
Jia, H. and Wang, N. (2014) Targeted Genome Editing of Sweet Orange Using Cas9/sgRNA. PLoS ONE, 9, e93806. https://doi.org/10.1031/journal.pone.0093806
|
[35]
|
Lowder, L.G., Zhang, Y., Baltes, N.J., Paul, J.W., Tang, X., Zheng, X., Voytas, D.F., Hsieh, T.-F., Zhang, Y. and Qi, Y. (2015) ACRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation. Plant Physiology, 169, 971-985. https://doi.org/10.1104/pp.15.00636
|
[36]
|
Cermak, T., Baltes, N.J., Cegan, R., Zhang, Y. and Voytas, D.F. (2015) High Frequency, Precise Modifications of the Tomato Genome. Genome Biology, 16, 232.
https://doi.org/10.1186/s13059-015-0796-9
|
[37]
|
Waltz, E. (2016) Gene-Edited CRISPR Mushroom Escapes US Regulation. Nature, 532, 293. https://doi.org/10.1038/nature.2016.19754
|
[38]
|
Maxmen, A. (2017) Engineered Apple Tests US Consumer’s Appetite. Nature, 551, 149-150. https://doi.org/10.1038/551149a
|